Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G08
         (256 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    29   0.020
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   1.3  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    22   4.1  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 29.5 bits (63), Expect = 0.020
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 LSEKRT*NFAIGQDIQTTRDLS 254
           L EKR  N+ IGQ++Q  RDLS
Sbjct: 37  LFEKRVKNYGIGQNVQPKRDLS 58


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 119 DREKSSGRSTCGEES*AQEDCKPS 190
           DR ++ GRS C   S +  D +PS
Sbjct: 884 DRSEAGGRSLCTNGSSSGRDSQPS 907


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein
          RS11 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 41 GHVSIRGR*IT 73
          GH+SIRGR +T
Sbjct: 59 GHISIRGRILT 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,964
Number of Sequences: 2352
Number of extensions: 2755
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 13619013
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)