Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G08
         (256 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...    30   0.37 
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...    30   0.37 
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...    30   0.37 
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...    30   0.37 
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...    30   0.37 
AE014134-741|AAF51010.1| 1008|Drosophila melanogaster CG15439-PA...    26   6.0  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 LSEKRT*NFAIGQDIQTTRDLS 254
           L EKR  NF IGQ++Q  RDLS
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLS 57


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 LSEKRT*NFAIGQDIQTTRDLS 254
           L EKR  NF IGQ++Q  RDLS
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLS 57


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 LSEKRT*NFAIGQDIQTTRDLS 254
           L EKR  NF IGQ++Q  RDLS
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLS 57


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 LSEKRT*NFAIGQDIQTTRDLS 254
           L EKR  NF IGQ++Q  RDLS
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLS 57


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score = 30.3 bits (65), Expect = 0.37
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +3

Query: 189 LSEKRT*NFAIGQDIQTTRDLS 254
           L EKR  NF IGQ++Q  RDLS
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLS 57


>AE014134-741|AAF51010.1| 1008|Drosophila melanogaster CG15439-PA
           protein.
          Length = 1008

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 131 SSGRSTCGEES*AQEDCKPSIREENIELC 217
           SS  STC  E    E C+  + E + ELC
Sbjct: 159 SSTNSTCSTEPWFCEACRAGVSEPDCELC 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,358,986
Number of Sequences: 53049
Number of extensions: 123259
Number of successful extensions: 278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)