Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G07
         (157 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   4.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   5.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   5.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          19   7.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   7.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   7.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   7.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   7.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   7.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    18   9.8  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 116 SWRRTNNSHY 145
           SWR TNN  Y
Sbjct: 218 SWRITNNLFY 227


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 28  TNIFIYLSNVSNIGIIEYK 84
           TN  +Y+++    G+I Y+
Sbjct: 202 TNTMVYIADEKGEGLIMYQ 220


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 27  DKYFYLPIKCF*YWNYRVQSLG 92
           DKY  +P   F  +N+R  + G
Sbjct: 216 DKYSNVPYFLFGDFNFRTDTAG 237


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = +2

Query: 104 QSPPSWRRTNNSHYVGTI 157
           ++P +      +HY+GT+
Sbjct: 160 ETPKNTSAVRYTHYIGTL 177


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 143 NENCSSDAMMAATVGTLS*ALYSII 69
           N N   DA++  TV + +  L  I+
Sbjct: 308 NNNVYKDALIVCTVNSCTSMLSGIV 332


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 143 NENCSSDAMMAATVGTLS*ALYSII 69
           N N   DA++  TV + +  L  I+
Sbjct: 361 NNNVYKDALIVCTVNSCTSMLSGIV 385


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 112 RRLWEPYPKLCTL 74
           RRL E Y  +C L
Sbjct: 209 RRLKETYSNMCAL 221


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 112 RRLWEPYPKLCTL 74
           RRL E Y  +C L
Sbjct: 209 RRLKETYSNMCAL 221


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 112 RRLWEPYPKLCTL 74
           RRL E Y  +C L
Sbjct: 209 RRLKETYSNMCAL 221


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 46  LSNVSNIGIIEYKA 87
           +SN   +G+ EY+A
Sbjct: 324 ISNKRRLGLTEYQA 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,940
Number of Sequences: 438
Number of extensions: 931
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)