Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G06
         (272 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   1.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   2.1  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   2.8  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    20   4.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   4.8  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   4.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   6.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   6.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   8.4  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -1

Query: 254 FKKVIQRAKGFLDYFLYK 201
           FKK +QR K + +Y++++
Sbjct: 132 FKKSVQRIKPYDEYYVWR 149


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 64  LREILSLVPGESSDQ 20
           L+ IL LVP  +SDQ
Sbjct: 112 LKVILDLVPNHTSDQ 126


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -2

Query: 166 GLYEEFPPLGDARAGGCCQGGCVRVSGSIRTSFLLREILSL 44
           GL  + PP+   +A      GC+    +    F++ ++L L
Sbjct: 248 GLKSDIPPVAYVKALDVWMAGCMMFVFAALGEFVVVKVLDL 288


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 160 YEEFPPLG 137
           ++EFPPLG
Sbjct: 415 FQEFPPLG 422


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 217 IISFIKYVFVMT*GIREGLYEEFPPLGDAR 128
           I+   K  F +  GI+  LY    P GDAR
Sbjct: 347 ILEPAKKGFKLKQGIQFHLYINTAPCGDAR 376


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 4.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 160 YEEFPPLG 137
           ++EFPPLG
Sbjct: 415 FQEFPPLG 422


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 225 PLSPLNNFFKL 257
           P+SPLN+++ L
Sbjct: 426 PISPLNDWYSL 436


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.8 bits (39), Expect = 6.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 269 DGVLEFKKVIQRAKGFLDYFL 207
           +G L  +      KGF +YFL
Sbjct: 393 EGTLSVQPQANPVKGFEEYFL 413


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 4   EFGTRAGPSSLP 39
           +FG + GP+ LP
Sbjct: 268 KFGDKVGPACLP 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,188
Number of Sequences: 438
Number of extensions: 1052
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)