Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_G04
(161 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 0.60
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 1.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 1.8
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 1.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 1.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 3.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 3.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 3.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 3.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 3.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 3.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 3.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 3.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 3.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 3.2
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 19 4.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 19 4.2
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 19 4.2
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 19 5.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 19 7.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 19 7.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 7.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 18 9.8
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 18 9.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 18 9.8
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 0.60
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 76 NLVCIQIVY-LGIRRDYHIQGKYL 144
N CIQIV+ L R YH+ Y+
Sbjct: 199 NFTCIQIVFNLRRRLGYHLFHTYI 222
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 1.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 54 SEYILRV*FSLYPDRIFRYPTRLPHSREVFE 146
S Y + FS +PD + YP L S + FE
Sbjct: 381 SGYTNEIDFS-FPDSVSDYPLELKGSPDGFE 410
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 65 NIFTGLFNIESLILNKESSPR 3
++ TG+ NIE+ I+N S +
Sbjct: 189 SVVTGMNNIETYIVNTNYSSK 209
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 65 NIFTGLFNIESLILNKESSPR 3
++ TG+ NIE+ I+N S +
Sbjct: 189 SVVTGMNNIETYIVNTNYSSK 209
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.6 bits (41), Expect = 1.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 151 NISNTSLECGNLVGYLNIRSGYKLNYTRKIYSLDYSI 41
++SN + + N Y N + NY +K+Y +Y I
Sbjct: 317 SLSN-NYKYSNYNNYNNYNNNNYNNYNKKLYYKNYII 352
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 315 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 315 ISNNN-SLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 4.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 148 ISNTSLECGNLVGYLNIRSGY-KLNYTRKIYSLDY 47
ISN + N Y N + Y K NY + Y+++Y
Sbjct: 82 ISNNN-PLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 19.4 bits (38), Expect = 4.2
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -2
Query: 151 NISNTSLECGNLVGYLNIRSGYKLN---YTRKIYSLDYSI 41
++SN ++ N Y N + Y N Y +K+Y +Y I
Sbjct: 84 SLSNKTIHNNNNYKY-NYNNKYNYNNNNYNKKLYYKNYII 122
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 19.4 bits (38), Expect = 4.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 1 ARGDDSLFSIKDSILNNPVN 60
A GD + + ILN PVN
Sbjct: 384 ANGDLNFNEVNFRILNAPVN 403
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 19.0 bits (37), Expect = 5.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -2
Query: 127 CGNLVGYLNIRSGYKL 80
C N Y++ SGY L
Sbjct: 184 CDNTYAYISDLSGYAL 199
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.6 bits (36), Expect = 7.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 151 NISNTSLECGNLVGYLNIRSGYKLNYTRKIYSLDYSI*NL 32
++SN ++ N N + NY +K+Y Y+I N+
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY---YNIINI 119
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.6 bits (36), Expect = 7.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = -2
Query: 151 NISNTSLECGNLVGYLNIRSGYKLNYTRKIYSLDYSI*NL 32
++SN ++ N N + NY +K+Y Y+I N+
Sbjct: 83 SLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY---YNIINI 119
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 103 NIRSGYKLNYTRKIYSLDYSI 41
N + Y NY +K+Y +Y I
Sbjct: 328 NYKYNYN-NYNKKLYYKNYII 347
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 79 NYTRKIYSLDYSI 41
NY +K+Y +Y I
Sbjct: 99 NYNKKLYYKNYII 111
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -2
Query: 94 SGYKLNYTRKIYSLDYSI 41
+ YK NY L Y+I
Sbjct: 94 NNYKYNYNNNCKKLYYNI 111
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +1
Query: 49 NPVNIFYVYNLVCIQIVYLGIRRDYHIQ 132
NPV ++YV +L + I+ ++D ++
Sbjct: 591 NPVQLWYVPSLDQVWILNWRNQKDIDVK 618
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,875
Number of Sequences: 438
Number of extensions: 686
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 33
effective length of database: 131,889
effective search space used: 2637780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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