Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G02
         (258 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HDZ3 Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 - Bo...    50   8e-06
UniRef50_Q24491 Cluster: RNA-binding protein Rsf1; n=6; Endopter...    38   0.059
UniRef50_A0B9R7 Cluster: Glycosyl transferase, group 1; n=1; Met...    32   2.9  
UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;...    31   3.8  
UniRef50_UPI00015B5C7C Cluster: PREDICTED: similar to ENSANGP000...    31   6.7  
UniRef50_P26686-8 Cluster: Isoform I of P26686 ; n=1; Drosophila...    31   6.7  
UniRef50_Q4UCK9 Cluster: RNA-binding protein, putative; n=2; The...    31   6.7  
UniRef50_UPI0000D9AF59 Cluster: PREDICTED: hypothetical protein;...    30   8.9  
UniRef50_Q4WCL2 Cluster: LMBR1 domain protein, putative; n=1; As...    30   8.9  

>UniRef50_Q1HDZ3 Cluster: Rsf1; n=3; Endopterygota|Rep: Rsf1 -
           Bombyx mori (Silk moth)
          Length = 143

 Score = 50.4 bits (115), Expect = 8e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +1

Query: 130 MSSGGTRVYVGGLVEGIKKEDLE 198
           MSSGGTRVYVGGLVEGIKKEDLE
Sbjct: 1   MSSGGTRVYVGGLVEGIKKEDLE 23



 Score = 39.1 bits (87), Expect = 0.019
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +2

Query: 203 EFDKYGKLNSEWVALNPP 256
           EF KYGKLNS WVALNPP
Sbjct: 25  EFAKYGKLNSVWVALNPP 42


>UniRef50_Q24491 Cluster: RNA-binding protein Rsf1; n=6;
           Endopterygota|Rep: RNA-binding protein Rsf1 - Drosophila
           melanogaster (Fruit fly)
          Length = 197

 Score = 37.5 bits (83), Expect = 0.059
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 203 EFDKYGKLNSEWVALNPP 256
           EF KYGKLNS W+A NPP
Sbjct: 26  EFTKYGKLNSVWIAFNPP 43



 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           GTRVYVG L + +KK+DLE
Sbjct: 6   GTRVYVGNLTDKVKKDDLE 24


>UniRef50_A0B9R7 Cluster: Glycosyl transferase, group 1; n=1;
           Methanosaeta thermophila PT|Rep: Glycosyl transferase,
           group 1 - Methanosaeta thermophila (strain DSM 6194 /
           PT) (Methanothrixthermophila (strain DSM 6194 / PT))
          Length = 366

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 106 LVNTNHTIMSSGGTRVYVGGLVEGIKKEDLEFGV 207
           L+ T +    +GG R YV GLVE +KK D++  V
Sbjct: 7   LITTTYWKGCAGGIRSYVEGLVEELKKRDIDVKV 40


>UniRef50_UPI000058483A Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 341

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 203 EFDKYGKLNSEWVALNPP 256
           EFD+YG +   WVA NPP
Sbjct: 31  EFDRYGPITDVWVARNPP 48


>UniRef50_UPI00015B5C7C Cluster: PREDICTED: similar to
           ENSANGP00000022151; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000022151 - Nasonia
           vitripennis
          Length = 497

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 179 SRRKISSLEFDKYGKLNSEWVALNPP 256
           S+ +I S  F KYG L + WVA NPP
Sbjct: 24  SKHEIESA-FSKYGPLRNVWVARNPP 48


>UniRef50_P26686-8 Cluster: Isoform I of P26686 ; n=1; Drosophila
           melanogaster|Rep: Isoform I of P26686 - Drosophila
           melanogaster (Fruit fly)
          Length = 171

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>UniRef50_Q4UCK9 Cluster: RNA-binding protein, putative; n=2;
           Theileria|Rep: RNA-binding protein, putative - Theileria
           annulata
          Length = 146

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYGK+ + WVA NPP
Sbjct: 31  FSKYGKVTNVWVARNPP 47


>UniRef50_UPI0000D9AF59 Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 257

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = -2

Query: 239 PILSLIFHIYQTPNSRSSFL-IPSTSPPTYTRVPPLLMI 126
           P+L L   + Q P+ RSS+  + +++PPT    PPLL++
Sbjct: 138 PLLLLQGCMEQRPHLRSSYCSVHTSAPPTAVSTPPLLLL 176


>UniRef50_Q4WCL2 Cluster: LMBR1 domain protein, putative; n=1;
           Aspergillus fumigatus|Rep: LMBR1 domain protein,
           putative - Aspergillus fumigatus (Sartorya fumigata)
          Length = 572

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -2

Query: 248 LMLPILSLIFHIYQTPNSRSSFL 180
           +++ + S+  H+YQTP  RSSF+
Sbjct: 19  VLIVVASVFIHVYQTPRDRSSFV 41


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,541,685
Number of Sequences: 1657284
Number of extensions: 3354360
Number of successful extensions: 9984
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9975
length of database: 575,637,011
effective HSP length: 63
effective length of database: 471,228,119
effective search space used: 10367018618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)