Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G02
         (258 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding pr...    22   3.2  
AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding pr...    22   3.2  
AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine pr...    22   3.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   4.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    21   7.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    21   9.8  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    21   9.8  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    21   9.8  

>AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP54 protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 192 IFLLDSLYEPTDVYASTSTAHDCMVCVYEVRL 97
           I  LD   + +     TS  HD M+C  E +L
Sbjct: 47  IIPLDGAEDCSSSVDETSEPHDKMMCTLECKL 78


>AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding
           protein OBP5470 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 192 IFLLDSLYEPTDVYASTSTAHDCMVCVYEVRL 97
           I  LD   + +     TS  HD M+C  E +L
Sbjct: 10  IIPLDGAEDCSSSVDETSEPHDKMMCTLECKL 41


>AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine
           protein 1 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 192 IFLLDSLYEPTDVYASTSTAHDCMVCVYEVRL 97
           I  LD   + +     TS  HD M+C  E +L
Sbjct: 47  IIPLDGAEDCSSSVDETSEPHDKMMCTLECKL 78


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 176 PSTSPPTYTRVPP 138
           PS+SPP    +PP
Sbjct: 744 PSSSPPVMESIPP 756


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 218 HIYQTPNSRSSFLIPSTSP 162
           HIY TP+S S     S SP
Sbjct: 357 HIYTTPSSNSLSTQHSHSP 375


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 112 NTNHTIMSSGGTRVYVGGLVEGIKK 186
           NTN+   ++GG  +  GG   G  K
Sbjct: 174 NTNNNGTTNGGGELTTGGGTNGCTK 198


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 215 IYQTPNSRSSFLIPSTSPPTYTRVPPLLM 129
           ++QTP   + +      PP  T+  P +M
Sbjct: 178 VHQTPQHMAMYTNAGGGPPGVTQQQPNMM 206


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 197 SRSSFLIPSTSPPTYTRV 144
           SRS FL  +T  PT+  V
Sbjct: 92  SRSRFLSAATPAPTHANV 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,175
Number of Sequences: 2352
Number of extensions: 3310
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 14058336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)