BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_G02
(258 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding pr... 38 0.003
L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding pr... 38 0.003
AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p pro... 38 0.003
AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA... 38 0.003
X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketi... 31 0.29
X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein. 31 0.29
BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p pro... 31 0.29
BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p pro... 31 0.29
AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p pro... 31 0.29
AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-P... 31 0.29
AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-P... 31 0.29
AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-P... 31 0.29
AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-P... 31 0.29
AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-P... 31 0.29
AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-P... 31 0.29
AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p pro... 29 0.68
AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA... 29 0.68
S51740-1|AAB24631.1| 39|Drosophila melanogaster RNA recognitio... 29 1.2
S51691-1|AAB24622.1| 39|Drosophila melanogaster RNA recognitio... 29 1.2
L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding pr... 29 1.2
AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p pro... 29 1.2
AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-P... 29 1.2
AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-P... 29 1.2
AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-P... 29 1.2
AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-P... 29 1.2
BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p pro... 28 1.6
AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p pro... 28 2.1
AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein... 28 2.1
AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family sp... 28 2.1
AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-P... 28 2.1
AY071657-1|AAL49279.1| 208|Drosophila melanogaster RE73905p pro... 27 2.7
AY058699-1|AAL13928.1| 600|Drosophila melanogaster LD42024p pro... 27 2.7
AE014298-3195|AAF50943.2| 208|Drosophila melanogaster CG17600-P... 27 2.7
AE014298-3192|AAF50946.2| 600|Drosophila melanogaster CG17600-P... 27 2.7
AE014134-2614|AAN10901.1| 409|Drosophila melanogaster CG17868-P... 27 4.8
AE014134-126|AAF51481.1| 795|Drosophila melanogaster CG11835-PA... 27 4.8
AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-P... 26 6.3
BT010113-1|AAQ22582.1| 1022|Drosophila melanogaster GH03748p pro... 26 8.4
AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC... 26 8.4
AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA... 26 8.4
>L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding
protein protein.
Length = 197
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 203 EFDKYGKLNSEWVALNPP 256
EF KYGKLNS W+A NPP
Sbjct: 26 EFTKYGKLNSVWIAFNPP 43
Score = 32.7 bits (71), Expect = 0.073
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
GTRVYVG L + +KK+DLE
Sbjct: 6 GTRVYVGNLTDKVKKDDLE 24
>L23835-1|AAA28729.1| 43|Drosophila melanogaster RNA binding
protein protein.
Length = 43
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 203 EFDKYGKLNSEWVALNPP 256
EF KYGKLNS W+A NPP
Sbjct: 19 EFTKYGKLNSVWIAFNPP 36
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 148 RVYVGGLVEGIKKEDLE 198
RVYVG L + +KK+DLE
Sbjct: 1 RVYVGNLTDKVKKDDLE 17
>AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p
protein.
Length = 200
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 203 EFDKYGKLNSEWVALNPP 256
EF KYGKLNS W+A NPP
Sbjct: 29 EFTKYGKLNSVWIAFNPP 46
Score = 32.7 bits (71), Expect = 0.073
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
GTRVYVG L + +KK+DLE
Sbjct: 9 GTRVYVGNLTDKVKKDDLE 27
>AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA
protein.
Length = 200
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 203 EFDKYGKLNSEWVALNPP 256
EF KYGKLNS W+A NPP
Sbjct: 29 EFTKYGKLNSVWIAFNPP 46
Score = 32.7 bits (71), Expect = 0.073
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
GTRVYVG L + +KK+DLE
Sbjct: 9 GTRVYVGNLTDKVKKDDLE 27
>X62599-1|CAA44483.1| 376|Drosophila melanogaster 52-kD bracketing
protein protein.
Length = 376
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>X58720-1|CAA41556.1| 350|Drosophila melanogaster SRp55 protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>BT003286-1|AAO25044.1| 350|Drosophila melanogaster GM10155p
protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>BT001495-1|AAN71250.1| 350|Drosophila melanogaster LD30815p
protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AY113327-1|AAM29332.1| 350|Drosophila melanogaster AT29232p
protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AE014297-1722|AAN13578.1| 147|Drosophila melanogaster CG10851-PF,
isoform F protein.
Length = 147
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AE014297-1721|AAN13577.1| 135|Drosophila melanogaster CG10851-PD,
isoform D protein.
Length = 135
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AE014297-1720|AAF54968.1| 329|Drosophila melanogaster CG10851-PB,
isoform B protein.
Length = 329
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AE014297-1719|AAN13576.1| 346|Drosophila melanogaster CG10851-PE,
isoform E protein.
Length = 346
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AE014297-1718|AAN13575.1| 350|Drosophila melanogaster CG10851-PC,
isoform C protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AE014297-1717|AAF54969.2| 350|Drosophila melanogaster CG10851-PA,
isoform A protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 142 GTRVYVGGLVEGIKKEDLE 198
G+RVYVGGL G+++ DLE
Sbjct: 3 GSRVYVGGLPYGVRERDLE 21
>AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p
protein.
Length = 158
Score = 29.5 bits (63), Expect = 0.68
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FSKYGPLRNVWVARNPP 47
>AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA
protein.
Length = 158
Score = 29.5 bits (63), Expect = 0.68
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FSKYGPLRNVWVARNPP 47
>S51740-1|AAB24631.1| 39|Drosophila melanogaster RNA recognition
motif-type RNA-binding protein protein.
Length = 39
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 18 FAKYGPLRNVWVARNPP 34
>S51691-1|AAB24622.1| 39|Drosophila melanogaster RNA recognition
motif-type RNA-binding protein protein.
Length = 39
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 18 FAKYGPLRNVWVARNPP 34
>L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding
protein protein.
Length = 135
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FAKYGPLRNVWVARNPP 47
>AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p
protein.
Length = 144
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FAKYGPLRNVWVARNPP 47
>AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-PB,
isoform B protein.
Length = 106
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FAKYGPLRNVWVARNPP 47
>AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-PD,
isoform D protein.
Length = 144
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FAKYGPLRNVWVARNPP 47
>AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-PC,
isoform C protein.
Length = 135
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FAKYGPLRNVWVARNPP 47
>AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-PA,
isoform A protein.
Length = 135
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F KYG L + WVA NPP
Sbjct: 31 FAKYGPLRNVWVARNPP 47
>BT001482-1|AAN71237.1| 187|Drosophila melanogaster LD22171p
protein.
Length = 187
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 145 TRVYVGGLVEGIKKEDLE 198
+RVYVGGL G+++ DLE
Sbjct: 1 SRVYVGGLPYGVRERDLE 18
>AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p
protein.
Length = 258
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F YG L S W+A NPP
Sbjct: 28 FGAYGSLRSVWIARNPP 44
>AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein
protein.
Length = 258
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F YG L S W+A NPP
Sbjct: 28 FGAYGSLRSVWIARNPP 44
>AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family
splicing factor 9G8 protein.
Length = 258
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F YG L S W+A NPP
Sbjct: 28 FGAYGSLRSVWIARNPP 44
>AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-PA
protein.
Length = 258
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 206 FDKYGKLNSEWVALNPP 256
F YG L S W+A NPP
Sbjct: 28 FGAYGSLRSVWIARNPP 44
>AY071657-1|AAL49279.1| 208|Drosophila melanogaster RE73905p
protein.
Length = 208
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Frame = -2
Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
TP SR LIPST +PP TR+PP
Sbjct: 35 TPPSRQIMLIPSTAGNGMAPPPPTRLPP 62
>AY058699-1|AAL13928.1| 600|Drosophila melanogaster LD42024p
protein.
Length = 600
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Frame = -2
Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
TP SR LIPST +PP TR+PP
Sbjct: 427 TPPSRQIMLIPSTAGNGMAPPPPTRLPP 454
>AE014298-3195|AAF50943.2| 208|Drosophila melanogaster CG17600-PB,
isoform B protein.
Length = 208
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Frame = -2
Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
TP SR LIPST +PP TR+PP
Sbjct: 35 TPPSRQIMLIPSTAGNGMAPPPPTRLPP 62
>AE014298-3192|AAF50946.2| 600|Drosophila melanogaster CG17600-PA,
isoform A protein.
Length = 600
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
Frame = -2
Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
TP SR LIPST +PP TR+PP
Sbjct: 427 TPPSRQIMLIPSTAGNGMAPPPPTRLPP 454
>AE014134-2614|AAN10901.1| 409|Drosophila melanogaster CG17868-PB
protein.
Length = 409
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 248 LMLPILSLIFHIYQTPNSRSSFLIPSTSPPTYTRVPPLLMIVW 120
L+ P+ S+I Q+ + S + P S P Y VP LL VW
Sbjct: 152 LIAPVFSII---NQSKDFLYSMIFPFDSDPLYIFVPLLLTNVW 191
>AE014134-126|AAF51481.1| 795|Drosophila melanogaster CG11835-PA
protein.
Length = 795
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 206 TPNSRSSFLIPSTSPPTYTRVPP 138
TP S L PST P T T VPP
Sbjct: 596 TPAEAPSPLAPSTPPSTPTSVPP 618
>AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-PB,
isoform B protein.
Length = 1662
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 245 MLPILSLIFHIYQTPNSRSSFLIPSTS 165
M PI L ++ PNSRS LI ST+
Sbjct: 1610 MSPIGQLTTEVFVLPNSRSMVLISSTN 1636
>BT010113-1|AAQ22582.1| 1022|Drosophila melanogaster GH03748p
protein.
Length = 1022
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 258 PGGFNATHSEFNFP-YLSNSKLEIFLLDSLYEPTDVYASTST 136
PG F T S F YL + L + L+ PT A TST
Sbjct: 378 PGTFTNTISSDEFQAYLDSKGLALMPRRELFSPTPTIARTST 419
>AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC,
isoform C protein.
Length = 1520
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 258 PGGFNATHSEFNFP-YLSNSKLEIFLLDSLYEPTDVYASTST 136
PG F T S F YL + L + L+ PT A TST
Sbjct: 378 PGTFTNTISSDEFQAYLDSKGLALMPRRELFSPTPTIARTST 419
>AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA,
isoform A protein.
Length = 1520
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 258 PGGFNATHSEFNFP-YLSNSKLEIFLLDSLYEPTDVYASTST 136
PG F T S F YL + L + L+ PT A TST
Sbjct: 378 PGTFTNTISSDEFQAYLDSKGLALMPRRELFSPTPTIARTST 419
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,414,385
Number of Sequences: 53049
Number of extensions: 153978
Number of successful extensions: 643
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 453457872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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