SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G02
         (258 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L34935-1|AAA73521.1|  197|Drosophila melanogaster RNA binding pr...    38   0.003
L23835-1|AAA28729.1|   43|Drosophila melanogaster RNA binding pr...    38   0.003
AY071363-1|AAL48985.1|  200|Drosophila melanogaster RE39606p pro...    38   0.003
AE014134-1804|AAF52890.1|  200|Drosophila melanogaster CG5655-PA...    38   0.003
X62599-1|CAA44483.1|  376|Drosophila melanogaster 52-kD bracketi...    31   0.29 
X58720-1|CAA41556.1|  350|Drosophila melanogaster SRp55 protein.       31   0.29 
BT003286-1|AAO25044.1|  350|Drosophila melanogaster GM10155p pro...    31   0.29 
BT001495-1|AAN71250.1|  350|Drosophila melanogaster LD30815p pro...    31   0.29 
AY113327-1|AAM29332.1|  350|Drosophila melanogaster AT29232p pro...    31   0.29 
AE014297-1722|AAN13578.1|  147|Drosophila melanogaster CG10851-P...    31   0.29 
AE014297-1721|AAN13577.1|  135|Drosophila melanogaster CG10851-P...    31   0.29 
AE014297-1720|AAF54968.1|  329|Drosophila melanogaster CG10851-P...    31   0.29 
AE014297-1719|AAN13576.1|  346|Drosophila melanogaster CG10851-P...    31   0.29 
AE014297-1718|AAN13575.1|  350|Drosophila melanogaster CG10851-P...    31   0.29 
AE014297-1717|AAF54969.2|  350|Drosophila melanogaster CG10851-P...    31   0.29 
AY113490-1|AAM29495.1|  158|Drosophila melanogaster RE47308p pro...    29   0.68 
AE014298-1899|AAF48264.2|  158|Drosophila melanogaster CG1987-PA...    29   0.68 
S51740-1|AAB24631.1|   39|Drosophila melanogaster RNA recognitio...    29   1.2  
S51691-1|AAB24622.1|   39|Drosophila melanogaster RNA recognitio...    29   1.2  
L04929-1|AAA28850.1|  135|Drosophila melanogaster RNA binding pr...    29   1.2  
AY069252-1|AAL39397.1|  144|Drosophila melanogaster GM02602p pro...    29   1.2  
AE014297-1200|AAN13488.1|  106|Drosophila melanogaster CG17136-P...    29   1.2  
AE014297-1199|AAN13487.1|  144|Drosophila melanogaster CG17136-P...    29   1.2  
AE014297-1198|AAN13486.1|  135|Drosophila melanogaster CG17136-P...    29   1.2  
AE014297-1197|AAF54555.1|  135|Drosophila melanogaster CG17136-P...    29   1.2  
BT001482-1|AAN71237.1|  187|Drosophila melanogaster LD22171p pro...    28   1.6  
AY095057-1|AAM11385.1|  258|Drosophila melanogaster LD46359p pro...    28   2.1  
AJ249466-1|CAB60724.1|  258|Drosophila melanogaster DXl6 protein...    28   2.1  
AF232774-1|AAF43414.1|  258|Drosophila melanogaster SR family sp...    28   2.1  
AE014134-1188|AAF52454.1|  258|Drosophila melanogaster CG10203-P...    28   2.1  
AY071657-1|AAL49279.1|  208|Drosophila melanogaster RE73905p pro...    27   2.7  
AY058699-1|AAL13928.1|  600|Drosophila melanogaster LD42024p pro...    27   2.7  
AE014298-3195|AAF50943.2|  208|Drosophila melanogaster CG17600-P...    27   2.7  
AE014298-3192|AAF50946.2|  600|Drosophila melanogaster CG17600-P...    27   2.7  
AE014134-2614|AAN10901.1|  409|Drosophila melanogaster CG17868-P...    27   4.8  
AE014134-126|AAF51481.1|  795|Drosophila melanogaster CG11835-PA...    27   4.8  
AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-P...    26   6.3  
BT010113-1|AAQ22582.1| 1022|Drosophila melanogaster GH03748p pro...    26   8.4  
AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC...    26   8.4  
AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA...    26   8.4  

>L34935-1|AAA73521.1|  197|Drosophila melanogaster RNA binding
           protein protein.
          Length = 197

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 203 EFDKYGKLNSEWVALNPP 256
           EF KYGKLNS W+A NPP
Sbjct: 26  EFTKYGKLNSVWIAFNPP 43



 Score = 32.7 bits (71), Expect = 0.073
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           GTRVYVG L + +KK+DLE
Sbjct: 6   GTRVYVGNLTDKVKKDDLE 24


>L23835-1|AAA28729.1|   43|Drosophila melanogaster RNA binding
           protein protein.
          Length = 43

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 203 EFDKYGKLNSEWVALNPP 256
           EF KYGKLNS W+A NPP
Sbjct: 19  EFTKYGKLNSVWIAFNPP 36



 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 148 RVYVGGLVEGIKKEDLE 198
           RVYVG L + +KK+DLE
Sbjct: 1   RVYVGNLTDKVKKDDLE 17


>AY071363-1|AAL48985.1|  200|Drosophila melanogaster RE39606p
           protein.
          Length = 200

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 203 EFDKYGKLNSEWVALNPP 256
           EF KYGKLNS W+A NPP
Sbjct: 29  EFTKYGKLNSVWIAFNPP 46



 Score = 32.7 bits (71), Expect = 0.073
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           GTRVYVG L + +KK+DLE
Sbjct: 9   GTRVYVGNLTDKVKKDDLE 27


>AE014134-1804|AAF52890.1|  200|Drosophila melanogaster CG5655-PA
           protein.
          Length = 200

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +2

Query: 203 EFDKYGKLNSEWVALNPP 256
           EF KYGKLNS W+A NPP
Sbjct: 29  EFTKYGKLNSVWIAFNPP 46



 Score = 32.7 bits (71), Expect = 0.073
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           GTRVYVG L + +KK+DLE
Sbjct: 9   GTRVYVGNLTDKVKKDDLE 27


>X62599-1|CAA44483.1|  376|Drosophila melanogaster 52-kD bracketing
           protein protein.
          Length = 376

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>X58720-1|CAA41556.1|  350|Drosophila melanogaster SRp55 protein.
          Length = 350

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>BT003286-1|AAO25044.1|  350|Drosophila melanogaster GM10155p
           protein.
          Length = 350

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>BT001495-1|AAN71250.1|  350|Drosophila melanogaster LD30815p
           protein.
          Length = 350

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AY113327-1|AAM29332.1|  350|Drosophila melanogaster AT29232p
           protein.
          Length = 350

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AE014297-1722|AAN13578.1|  147|Drosophila melanogaster CG10851-PF,
           isoform F protein.
          Length = 147

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AE014297-1721|AAN13577.1|  135|Drosophila melanogaster CG10851-PD,
           isoform D protein.
          Length = 135

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AE014297-1720|AAF54968.1|  329|Drosophila melanogaster CG10851-PB,
           isoform B protein.
          Length = 329

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AE014297-1719|AAN13576.1|  346|Drosophila melanogaster CG10851-PE,
           isoform E protein.
          Length = 346

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AE014297-1718|AAN13575.1|  350|Drosophila melanogaster CG10851-PC,
           isoform C protein.
          Length = 350

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AE014297-1717|AAF54969.2|  350|Drosophila melanogaster CG10851-PA,
           isoform A protein.
          Length = 350

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +1

Query: 142 GTRVYVGGLVEGIKKEDLE 198
           G+RVYVGGL  G+++ DLE
Sbjct: 3   GSRVYVGGLPYGVRERDLE 21


>AY113490-1|AAM29495.1|  158|Drosophila melanogaster RE47308p
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FSKYGPLRNVWVARNPP 47


>AE014298-1899|AAF48264.2|  158|Drosophila melanogaster CG1987-PA
           protein.
          Length = 158

 Score = 29.5 bits (63), Expect = 0.68
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FSKYGPLRNVWVARNPP 47


>S51740-1|AAB24631.1|   39|Drosophila melanogaster RNA recognition
           motif-type RNA-binding protein protein.
          Length = 39

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 18  FAKYGPLRNVWVARNPP 34


>S51691-1|AAB24622.1|   39|Drosophila melanogaster RNA recognition
           motif-type RNA-binding protein protein.
          Length = 39

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 18  FAKYGPLRNVWVARNPP 34


>L04929-1|AAA28850.1|  135|Drosophila melanogaster RNA binding
           protein protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FAKYGPLRNVWVARNPP 47


>AY069252-1|AAL39397.1|  144|Drosophila melanogaster GM02602p
           protein.
          Length = 144

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FAKYGPLRNVWVARNPP 47


>AE014297-1200|AAN13488.1|  106|Drosophila melanogaster CG17136-PB,
           isoform B protein.
          Length = 106

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FAKYGPLRNVWVARNPP 47


>AE014297-1199|AAN13487.1|  144|Drosophila melanogaster CG17136-PD,
           isoform D protein.
          Length = 144

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FAKYGPLRNVWVARNPP 47


>AE014297-1198|AAN13486.1|  135|Drosophila melanogaster CG17136-PC,
           isoform C protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FAKYGPLRNVWVARNPP 47


>AE014297-1197|AAF54555.1|  135|Drosophila melanogaster CG17136-PA,
           isoform A protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F KYG L + WVA NPP
Sbjct: 31  FAKYGPLRNVWVARNPP 47


>BT001482-1|AAN71237.1|  187|Drosophila melanogaster LD22171p
           protein.
          Length = 187

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 145 TRVYVGGLVEGIKKEDLE 198
           +RVYVGGL  G+++ DLE
Sbjct: 1   SRVYVGGLPYGVRERDLE 18


>AY095057-1|AAM11385.1|  258|Drosophila melanogaster LD46359p
           protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F  YG L S W+A NPP
Sbjct: 28  FGAYGSLRSVWIARNPP 44


>AJ249466-1|CAB60724.1|  258|Drosophila melanogaster DXl6 protein
           protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F  YG L S W+A NPP
Sbjct: 28  FGAYGSLRSVWIARNPP 44


>AF232774-1|AAF43414.1|  258|Drosophila melanogaster SR family
           splicing factor 9G8 protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F  YG L S W+A NPP
Sbjct: 28  FGAYGSLRSVWIARNPP 44


>AE014134-1188|AAF52454.1|  258|Drosophila melanogaster CG10203-PA
           protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 206 FDKYGKLNSEWVALNPP 256
           F  YG L S W+A NPP
Sbjct: 28  FGAYGSLRSVWIARNPP 44


>AY071657-1|AAL49279.1|  208|Drosophila melanogaster RE73905p
           protein.
          Length = 208

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = -2

Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
           TP SR   LIPST     +PP  TR+PP
Sbjct: 35  TPPSRQIMLIPSTAGNGMAPPPPTRLPP 62


>AY058699-1|AAL13928.1|  600|Drosophila melanogaster LD42024p
           protein.
          Length = 600

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = -2

Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
           TP SR   LIPST     +PP  TR+PP
Sbjct: 427 TPPSRQIMLIPSTAGNGMAPPPPTRLPP 454


>AE014298-3195|AAF50943.2|  208|Drosophila melanogaster CG17600-PB,
           isoform B protein.
          Length = 208

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = -2

Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
           TP SR   LIPST     +PP  TR+PP
Sbjct: 35  TPPSRQIMLIPSTAGNGMAPPPPTRLPP 62


>AE014298-3192|AAF50946.2|  600|Drosophila melanogaster CG17600-PA,
           isoform A protein.
          Length = 600

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%)
 Frame = -2

Query: 206 TPNSRSSFLIPST-----SPPTYTRVPP 138
           TP SR   LIPST     +PP  TR+PP
Sbjct: 427 TPPSRQIMLIPSTAGNGMAPPPPTRLPP 454


>AE014134-2614|AAN10901.1|  409|Drosophila melanogaster CG17868-PB
           protein.
          Length = 409

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 248 LMLPILSLIFHIYQTPNSRSSFLIPSTSPPTYTRVPPLLMIVW 120
           L+ P+ S+I    Q+ +   S + P  S P Y  VP LL  VW
Sbjct: 152 LIAPVFSII---NQSKDFLYSMIFPFDSDPLYIFVPLLLTNVW 191


>AE014134-126|AAF51481.1|  795|Drosophila melanogaster CG11835-PA
           protein.
          Length = 795

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -2

Query: 206 TPNSRSSFLIPSTSPPTYTRVPP 138
           TP    S L PST P T T VPP
Sbjct: 596 TPAEAPSPLAPSTPPSTPTSVPP 618


>AE014296-2749|AAF49454.2| 1662|Drosophila melanogaster CG32158-PB,
            isoform B protein.
          Length = 1662

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 245  MLPILSLIFHIYQTPNSRSSFLIPSTS 165
            M PI  L   ++  PNSRS  LI ST+
Sbjct: 1610 MSPIGQLTTEVFVLPNSRSMVLISSTN 1636


>BT010113-1|AAQ22582.1| 1022|Drosophila melanogaster GH03748p
           protein.
          Length = 1022

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 258 PGGFNATHSEFNFP-YLSNSKLEIFLLDSLYEPTDVYASTST 136
           PG F  T S   F  YL +  L +     L+ PT   A TST
Sbjct: 378 PGTFTNTISSDEFQAYLDSKGLALMPRRELFSPTPTIARTST 419


>AE014298-2332|AAF48567.2| 1520|Drosophila melanogaster CG9216-PC,
           isoform C protein.
          Length = 1520

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 258 PGGFNATHSEFNFP-YLSNSKLEIFLLDSLYEPTDVYASTST 136
           PG F  T S   F  YL +  L +     L+ PT   A TST
Sbjct: 378 PGTFTNTISSDEFQAYLDSKGLALMPRRELFSPTPTIARTST 419


>AE014298-2331|AAF48565.1| 1520|Drosophila melanogaster CG9216-PA,
           isoform A protein.
          Length = 1520

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = -1

Query: 258 PGGFNATHSEFNFP-YLSNSKLEIFLLDSLYEPTDVYASTST 136
           PG F  T S   F  YL +  L +     L+ PT   A TST
Sbjct: 378 PGTFTNTISSDEFQAYLDSKGLALMPRRELFSPTPTIARTST 419


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,414,385
Number of Sequences: 53049
Number of extensions: 153978
Number of successful extensions: 643
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 453457872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -