Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G02
         (258 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   5.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   5.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   7.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    19   7.4  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 99  ILPRKHKPYNHEQ 137
           +LP+ H+ ++H+Q
Sbjct: 5   MLPKYHQQFHHQQ 17


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 206 TPNSRSSFLIPSTSPPTYTRVPPLL 132
           T +  +  L+ +   P YT  PP L
Sbjct: 193 TRDKVAPILVRARETPNYTACPPTL 217


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 188 KISSLEFDKYGKLNSEWV 241
           KIS+L FDK   L    V
Sbjct: 371 KISNLSFDKQSLLKENTV 388


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.4 bits (38), Expect = 7.4
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +1

Query: 103 YLVNTNHTIMSSGGTRVY-VGGLV 171
           YL + N+T +S  GT+ +  GGL+
Sbjct: 189 YLKSENNTELSRVGTKYHRSGGLM 212


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,934
Number of Sequences: 438
Number of extensions: 1081
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)