Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G01
         (300 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   0.82 
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        23   2.5  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   2.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   4.3  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   5.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   5.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    21   7.6  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 152 RLEDLHQLQRPYAFHRRYGACAHPPLQ 72
           R+E + +L    AF R +GA + PP +
Sbjct: 846 RIESIQRLFTRVAFRRLFGAASLPPYE 872


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 283 WSVARVAFRHQETYTAVSQDSL 218
           W++AR  FRH+++    S  S+
Sbjct: 46  WNLAREVFRHEDSNVVFSPFSI 67


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 206 SPKSRYRRQHGEH 168
           SPK + ++QHG+H
Sbjct: 275 SPKEQQQQQHGQH 287


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 277 VARVAFRHQETYTAVSQDSLFHREALKVV 191
           VAR AFR   +Y  +    +  +E  K++
Sbjct: 173 VARTAFRDNSSYYTIDNKRVHFKEVSKLL 201


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 101 YGACAHPPLQITSDIPLP 48
           Y    HPP++ T  +P P
Sbjct: 420 YWRATHPPVRPTPSVPRP 437


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 116  RMGAEVDADLLGDEWKGYVLRVAGGND 196
            R   E  A L+   WK Y  R  GG D
Sbjct: 1988 RQREEYCARLIQHAWKRYKQRHGGGTD 2014


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 146  LGDEWKGYVLRVAGGN 193
            +GDE  GY   VAGG+
Sbjct: 1139 IGDEGWGYYETVAGGS 1154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,934
Number of Sequences: 2352
Number of extensions: 5008
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)