Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_G01
         (300 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...   141   7e-35
Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical pr...    27   2.5  
AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical ...    27   2.5  
Z82077-9|CAB04941.1|  259|Caenorhabditis elegans Hypothetical pr...    27   3.3  
AL032650-2|CAA21705.1|  259|Caenorhabditis elegans Hypothetical ...    27   3.3  
Z81477-4|CAB03925.2|  279|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z54216-9|CAN86906.1|  155|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z54216-8|CAA90948.1|  101|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z54216-7|CAI46586.1|  299|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z54216-6|CAB76416.2|  319|Caenorhabditis elegans Hypothetical pr...    26   4.4  
U40483-1|AAA99775.1|  322|Caenorhabditis elegans NEX1 annexin pr...    26   5.8  
U00064-7|AAB52702.1|  322|Caenorhabditis elegans Annexin family ...    26   5.8  
AC006804-1|AAF60755.1|  340|Caenorhabditis elegans Hypothetical ...    26   5.8  
AL034391-1|CAA22302.2|  333|Caenorhabditis elegans Hypothetical ...    25   7.6  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score =  141 bits (342), Expect = 7e-35
 Identities = 63/91 (69%), Positives = 74/91 (81%)
 Frame = +2

Query: 26  MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDF*G 205
           M+LN +YPATG QK FEV +E KLR+F+EKRM  EV  D LGDEWKGYV+R+ GGND  G
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 206 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 298
           FPMKQG+LTN RVRLL+ KG SCYR R++GE
Sbjct: 61  FPMKQGILTNGRVRLLLKKGQSCYRERKNGE 91


>Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 167 NLSIRRLEDLHQLQRPYAFHRRY 99
           N+ +RRLE+L  ++RP   H R+
Sbjct: 227 NMVVRRLEELGAIERPLNLHVRF 249


>AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 167 NLSIRRLEDLHQLQRPYAFHRRY 99
           N+ +RRLE+L  ++RP   H R+
Sbjct: 227 NMVVRRLEELGAIERPLNLHVRF 249


>Z82077-9|CAB04941.1|  259|Caenorhabditis elegans Hypothetical
           protein W09C5.1 protein.
          Length = 259

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 125 RPYAFHRRYGACAHPPLQITSDIPLPGMKRSTS 27
           RP     +     HP LQ T  +P+ G+K++ S
Sbjct: 171 RPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPS 203


>AL032650-2|CAA21705.1|  259|Caenorhabditis elegans Hypothetical
           protein W09C5.1 protein.
          Length = 259

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 125 RPYAFHRRYGACAHPPLQITSDIPLPGMKRSTS 27
           RP     +     HP LQ T  +P+ G+K++ S
Sbjct: 171 RPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPS 203


>Z81477-4|CAB03925.2|  279|Caenorhabditis elegans Hypothetical
           protein C27C7.5 protein.
          Length = 279

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +2

Query: 5   DEGLIAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWK 163
           +E L   MK+N S   T C          K+R  +E    +  +    GD WK
Sbjct: 80  EENLKVAMKINNSTADTTCPTSISGSFPSKMRSMWETFTNSNYNITFTGDLWK 132


>Z54216-9|CAN86906.1|  155|Caenorhabditis elegans Hypothetical
           protein T24H10.7d protein.
          Length = 155

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 50  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 148
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 94  ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 127


>Z54216-8|CAA90948.1|  101|Caenorhabditis elegans Hypothetical
           protein T24H10.7c protein.
          Length = 101

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 50  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 148
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 40  ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 73


>Z54216-7|CAI46586.1|  299|Caenorhabditis elegans Hypothetical
           protein T24H10.7b protein.
          Length = 299

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 50  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 148
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 238 ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 271


>Z54216-6|CAB76416.2|  319|Caenorhabditis elegans Hypothetical
           protein T24H10.7a protein.
          Length = 319

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 50  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 148
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 258 ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 291


>U40483-1|AAA99775.1|  322|Caenorhabditis elegans NEX1 annexin
           protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 95  LRIFYEKRMGAEVDADLLGD 154
           +R+ YEK  G  ++AD+ GD
Sbjct: 122 IRVTYEKEYGKALEADIAGD 141


>U00064-7|AAB52702.1|  322|Caenorhabditis elegans Annexin family
           protein 1 protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 95  LRIFYEKRMGAEVDADLLGD 154
           +R+ YEK  G  ++AD+ GD
Sbjct: 122 IRVTYEKEYGKALEADIAGD 141


>AC006804-1|AAF60755.1|  340|Caenorhabditis elegans Hypothetical
           protein Y53G8B.2 protein.
          Length = 340

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 59  CQKLFEVVDEHKLRIFYEK 115
           CQKL E+ DEHK +   EK
Sbjct: 315 CQKLTELFDEHKEKYGVEK 333


>AL034391-1|CAA22302.2|  333|Caenorhabditis elegans Hypothetical
           protein Y40H4A.2 protein.
          Length = 333

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -2

Query: 179 HGEHNLSIRRLEDLHQLQRPYAFHRRYG-AC 90
           HG  +  I++LED+ ++QRP  F   YG AC
Sbjct: 197 HGGISPHIQKLEDIDKIQRP-TFIPSYGLAC 226


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,469,687
Number of Sequences: 27780
Number of extensions: 116896
Number of successful extensions: 270
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)