Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F23
(466 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071419-1|AAL49041.1| 147|Drosophila melanogaster RE49992p pro... 83 1e-16
AE014298-2036|AAF48375.1| 147|Drosophila melanogaster CG12540-P... 83 1e-16
BT023506-1|AAY84906.1| 444|Drosophila melanogaster LD16996p pro... 30 1.8
AY071600-1|AAL49222.1| 419|Drosophila melanogaster RE65123p pro... 30 1.8
AY061932-1|AAL31643.1| 444|Drosophila melanogaster alpha 1,3 fu... 30 1.8
AJ302046-1|CAC41642.1| 444|Drosophila melanogaster fucosyltrans... 30 1.8
AE014296-3290|AAF49058.3| 419|Drosophila melanogaster CG7290-PA... 30 1.8
AE014134-1635|AAF52773.4| 444|Drosophila melanogaster CG4435-PA... 30 1.8
BT015221-1|AAT94450.1| 1216|Drosophila melanogaster RE35187p pro... 29 3.1
AE013599-1707|AAM68575.1| 1360|Drosophila melanogaster CG17034-P... 29 3.1
AE013599-1706|AAM68574.1| 1360|Drosophila melanogaster CG17034-P... 29 3.1
AY118738-1|AAM50598.1| 87|Drosophila melanogaster GH04760p pro... 28 5.4
BT001657-1|AAN71412.1| 773|Drosophila melanogaster RE45289p pro... 28 7.1
AY070958-1|AAL48580.1| 773|Drosophila melanogaster RE05926p pro... 28 7.1
AE014297-3735|AAF56414.2| 773|Drosophila melanogaster CG10244-P... 28 7.1
>AY071419-1|AAL49041.1| 147|Drosophila melanogaster RE49992p
protein.
Length = 147
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/59 (62%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
Frame = +3
Query: 204 LCDSSVYSYCSHKQAHDACCC--YGGGFQF---NCLNSNCKFLYANSCQEHDMITNCCC 365
LCDSSVYSYCSHK HDACCC GG Q CL +C LYA SC EH +I NCCC
Sbjct: 85 LCDSSVYSYCSHKMVHDACCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCCC 143
>AE014298-2036|AAF48375.1| 147|Drosophila melanogaster CG12540-PA
protein.
Length = 147
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/59 (62%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
Frame = +3
Query: 204 LCDSSVYSYCSHKQAHDACCC--YGGGFQF---NCLNSNCKFLYANSCQEHDMITNCCC 365
LCDSSVYSYCSHK HDACCC GG Q CL +C LYA SC EH +I NCCC
Sbjct: 85 LCDSSVYSYCSHKMVHDACCCDFPGGAPQLRPPQCLYYDCSLLYAKSCYEHALIKNCCC 143
>BT023506-1|AAY84906.1| 444|Drosophila melanogaster LD16996p
protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -2
Query: 240 CGSNSCRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILGKIRDSAGRTQHR 61
CG ++CR+ N+ R RP +GV + S + G +P + I + + + R
Sbjct: 60 CGIHTCRITNK----RSRRPWARGVLFYGSNIKTGDFPLPRNEHQIWALLHEESPRNTPF 115
Query: 60 LSN 52
+SN
Sbjct: 116 VSN 118
>AY071600-1|AAL49222.1| 419|Drosophila melanogaster RE65123p
protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 210 DSSVYSYCSHKQAHDACCCYGGGFQFNCLNSNCKFLYANSCQE 338
D S +++C H C G FN SNC + A+SC +
Sbjct: 174 DCSGWNFCQDNVLHSGSC--EDGLVFNVQASNCGYKMASSCAQ 214
>AY061932-1|AAL31643.1| 444|Drosophila melanogaster alpha 1,3
fucosyltransferase protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -2
Query: 240 CGSNSCRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILGKIRDSAGRTQHR 61
CG ++CR+ N+ R RP +GV + S + G +P + I + + + R
Sbjct: 60 CGIHTCRITNK----RSRRPWARGVLFYGSNIKTGDFPLPRNEHQIWALLHEESPRNTPF 115
Query: 60 LSN 52
+SN
Sbjct: 116 VSN 118
>AJ302046-1|CAC41642.1| 444|Drosophila melanogaster
fucosyltransferase homologue protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -2
Query: 240 CGSNSCRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILGKIRDSAGRTQHR 61
CG ++CR+ N+ R RP +GV + S + G +P + I + + + R
Sbjct: 60 CGIHTCRITNK----RSRRPWARGVLFYGSNIKTGDFPLPRNEHQIWALLHEESPRNTPF 115
Query: 60 LSN 52
+SN
Sbjct: 116 VSN 118
>AE014296-3290|AAF49058.3| 419|Drosophila melanogaster CG7290-PA
protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 210 DSSVYSYCSHKQAHDACCCYGGGFQFNCLNSNCKFLYANSCQE 338
D S +++C H C G FN SNC + A+SC +
Sbjct: 174 DCSGWNFCQDNVLHSGSC--EDGLVFNVQASNCGYKMASSCAQ 214
>AE014134-1635|AAF52773.4| 444|Drosophila melanogaster CG4435-PA
protein.
Length = 444
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -2
Query: 240 CGSNSCRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILGKIRDSAGRTQHR 61
CG ++CR+ N+ R RP +GV + S + G +P + I + + + R
Sbjct: 60 CGIHTCRITNK----RSRRPWARGVLFYGSNIKTGDFPLPRNEHQIWALLHEESPRNTPF 115
Query: 60 LSN 52
+SN
Sbjct: 116 VSN 118
>BT015221-1|AAT94450.1| 1216|Drosophila melanogaster RE35187p
protein.
Length = 1216
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 213 NRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQD 109
+RR+D V ++Q V+N+ R RPG + + +D
Sbjct: 119 HRRLDESSVMGSMQSVKNYIKRTRPGRKKRKDDED 153
>AE013599-1707|AAM68575.1| 1360|Drosophila melanogaster CG17034-PC,
isoform C protein.
Length = 1360
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 213 NRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQD 109
+RR+D V ++Q V+N+ R RPG + + +D
Sbjct: 119 HRRLDESSVMGSMQSVKNYIKRTRPGRKKRKDDED 153
>AE013599-1706|AAM68574.1| 1360|Drosophila melanogaster CG17034-PB,
isoform B protein.
Length = 1360
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 213 NRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQD 109
+RR+D V ++Q V+N+ R RPG + + +D
Sbjct: 119 HRRLDESSVMGSMQSVKNYIKRTRPGRKKRKDDED 153
>AY118738-1|AAM50598.1| 87|Drosophila melanogaster GH04760p
protein.
Length = 87
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +2
Query: 65 CCVRPALSRILPRILSWTSGTWAVPGRARLRKLRTPWTAGRTS 193
CC R + SR TSG W P A +P T RTS
Sbjct: 23 CCPRTSSSRTSAGRSGTTSGLWRTPAAAGNTSGTSPGTPTRTS 65
>BT001657-1|AAN71412.1| 773|Drosophila melanogaster RE45289p
protein.
Length = 773
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 267 NSSMHHELVCGSNSCRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILG 97
NSS + SN ++ + D P VQ +RN +RPG P Q++I G
Sbjct: 164 NSSGYRPQTSISNVVHNISQFLPRFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFG 220
>AY070958-1|AAL48580.1| 773|Drosophila melanogaster RE05926p
protein.
Length = 773
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 267 NSSMHHELVCGSNSCRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILG 97
NSS + SN ++ + D P VQ +RN +RPG P Q++I G
Sbjct: 164 NSSGYRPQTSISNVVHNISQFLPRFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFG 220
>AE014297-3735|AAF56414.2| 773|Drosophila melanogaster CG10244-PA
protein.
Length = 773
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 267 NSSMHHELVCGSNSCRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILG 97
NSS + SN ++ + D P VQ +RN +RPG P Q++I G
Sbjct: 164 NSSGYRPQTSISNVVHNISQFLPRFDQLPGVQSIRNGLPNSRPGGWYPPVPQNNIFG 220
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,766,111
Number of Sequences: 53049
Number of extensions: 314126
Number of successful extensions: 989
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -