Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F22
(422 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181; Eukary... 204 8e-52
UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeb... 124 1e-27
UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5... 118 5e-26
UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus M... 96 2e-19
UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2; Methano... 96 2e-19
UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1; Encephal... 86 3e-16
UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 85 4e-16
UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5; Thermop... 85 7e-16
UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12; Archae... 84 1e-15
UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultu... 81 9e-15
UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8; Euryarc... 81 1e-14
UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella... 80 2e-14
UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2; Sulfolo... 79 3e-14
UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcu... 77 1e-13
UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3; Halobac... 75 8e-13
UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3; Methano... 71 1e-11
UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep... 70 2e-11
UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5; Archaea... 70 2e-11
UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n... 68 9e-11
UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3; Thermop... 65 6e-10
UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3; Euth... 60 2e-08
UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1... 60 2e-08
UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1; Arabid... 54 9e-07
UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n... 50 2e-05
UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n... 35 0.79
UniRef50_Q2UJB9 Cluster: Predicted protein; n=1; Aspergillus ory... 34 1.4
UniRef50_Q4P328 Cluster: Helicase SWR1; n=1; Ustilago maydis|Rep... 33 1.8
UniRef50_A0BWL3 Cluster: Chromosome undetermined scaffold_132, w... 33 2.4
UniRef50_A0B7K6 Cluster: Thiamine biosynthesis protein; n=1; Met... 32 4.2
UniRef50_Q8RE43 Cluster: 30S ribosomal protein S4; n=6; Bacteria... 32 4.2
UniRef50_Q6MIP0 Cluster: 30S ribosomal protein S4 B; n=1; Bdello... 32 4.2
UniRef50_A3X9S8 Cluster: Sensor protein; n=2; Roseobacter|Rep: S... 32 5.6
UniRef50_A1VAB9 Cluster: DegT/DnrJ/EryC1/StrS aminotransferase; ... 32 5.6
UniRef50_A7M543 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
UniRef50_Q8F458 Cluster: Putative uncharacterized protein; n=4; ... 31 9.7
UniRef50_Q2S493 Cluster: ISSru4, transposase; n=1; Salinibacter ... 31 9.7
UniRef50_Q2J784 Cluster: RNA polymerase sigma factor; n=6; Actin... 31 9.7
UniRef50_A4C1Y1 Cluster: Putative outer membrane protein; n=1; P... 31 9.7
UniRef50_Q4DJR5 Cluster: Phosphatidylinositol kinase domain prot... 31 9.7
UniRef50_Q1E4I6 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_Q96XL2 Cluster: Putative uncharacterized protein ST2504... 31 9.7
UniRef50_Q8GXF6 Cluster: F-box/kelch-repeat protein At4g19870; n... 31 9.7
>UniRef50_P46781 Cluster: 40S ribosomal protein S9; n=181;
Eukaryota|Rep: 40S ribosomal protein S9 - Homo sapiens
(Human)
Length = 194
Score = 204 bits (497), Expect = 8e-52
Identities = 97/121 (80%), Positives = 106/121 (87%)
Frame = +1
Query: 58 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 237
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 238 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 417
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 418 I 420
+
Sbjct: 128 V 128
>UniRef50_O15612 Cluster: 40S ribosomal protein S9; n=2; Entamoeba
histolytica|Rep: 40S ribosomal protein S9 - Entamoeba
histolytica
Length = 185
Score = 124 bits (298), Expect = 1e-27
Identities = 59/119 (49%), Positives = 79/119 (66%)
Frame = +1
Query: 64 SKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPK 243
S TY TP+ P+E+ R D ELK++G++GL+NK+E+ RV Y L +R A+ +L + KDPK
Sbjct: 9 SITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPK 68
Query: 244 RLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 420
RL EG A Q KL++VL LK E+ LERRLQT V++ G AKSIHHAR+
Sbjct: 69 RLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFAKSIHHARV 127
>UniRef50_Q10KL6 Cluster: 40S ribosomal protein S9, putative; n=5;
Oryza sativa|Rep: 40S ribosomal protein S9, putative -
Oryza sativa subsp. japonica (Rice)
Length = 157
Score = 118 bits (284), Expect = 5e-26
Identities = 62/120 (51%), Positives = 77/120 (64%)
Frame = +1
Query: 61 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 240
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ ELLTL+EK+P
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQ-----------ELLTLDEKNP 58
Query: 241 KRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 420
+R+FEG A E Q KLDYVL L +E+FL+ RLQT VFK G KSIHH +
Sbjct: 59 RRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNGTVKSIHHDHV 118
>UniRef50_A7IAH7 Cluster: Ribosomal protein S4; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S4 -
Methanoregula boonei (strain 6A8)
Length = 185
Score = 96.3 bits (229), Expect = 2e-19
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTL-E 228
P K+Y TP+RPFEK R+++E +++ EYGLRNKREVW+ + L + RKAARELL L
Sbjct: 4 PGKNHKSYQTPKRPFEKTRIEEETRLVIEYGLRNKREVWKAQSHLRKYRKAARELLALMS 63
Query: 229 EKDPKRLFEG-NAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSI 405
+ +FE + +D VL LK+ LERRLQT V++ GLA+S
Sbjct: 64 SATNQTVFEAKKSELISHMQRAGLLGPDADIDNVLALKVPAQLERRLQTLVYRKGLARSP 123
Query: 406 HHAR 417
AR
Sbjct: 124 KQAR 127
>UniRef50_Q2FT97 Cluster: 30S ribosomal protein S4P; n=2;
Methanomicrobiales|Rep: 30S ribosomal protein S4P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 181
Score = 96.3 bits (229), Expect = 2e-19
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 231
P K Y TP+RPFE +R+++E +++ EYGLRNKREVW K L + RKAARE++ L+
Sbjct: 4 PGKNHKQYQTPKRPFELSRIEEETRLVIEYGLRNKREVWIAKGALRKYRKAAREIIALQS 63
Query: 232 --KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSI 405
+ R+ + +D VL LK+E L+RRLQTQV++ G A+S
Sbjct: 64 TGSEQARVERKKDELIGSLQRSGMLSENADIDDVLALKVEQQLDRRLQTQVYRRGFARSP 123
Query: 406 HHAR 417
AR
Sbjct: 124 KQAR 127
>UniRef50_Q8SRW6 Cluster: 40S RIBOSOMAL PROTEIN S9; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S9 -
Encephalitozoon cuniculi
Length = 184
Score = 85.8 bits (203), Expect = 3e-16
Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Frame = +1
Query: 64 SKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP- 240
SK TPR PFEK RL +E +++G YGL+NK E+W ++ A+ ++ AR LLT +
Sbjct: 7 SKRASTPRDPFEKERLIREAQLVGVYGLKNKHELWVMEKIFAKDKERARILLTSTNPEDI 66
Query: 241 ----KRLFEGNAXXXXXXXXXXXDEKQMK--LDYVLGLKIEDFLERRLQTQVFKAGLAKS 402
+ L D++++ L+ VL L I +LERRLQ +VF AGLAKS
Sbjct: 67 PINGRSLLRRLMKYGILGGIDLCDKQEVVNGLNKVLDLTINHYLERRLQFRVFAAGLAKS 126
Query: 403 IHHARI 420
+HHAR+
Sbjct: 127 VHHARL 132
>UniRef50_Q97B95 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Thermoplasma
volcanium
Length = 200
Score = 85.4 bits (202), Expect = 4e-16
Identities = 52/123 (42%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAAREL-LTLE 228
P K Y TPR P+EK R+D+E KI+ +YGL+NKRE+WR + L+ IR AR L L
Sbjct: 4 PKFHHKKYSTPRHPWEKDRIDEENKILVKYGLKNKREIWRSEAMLSSIRSQARYLRARLR 63
Query: 229 EKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIH 408
D + +K LD VL L +E+ L+RRLQT VFK LA S
Sbjct: 64 ASDANAQKQLERMIKRLSRYKILSDK-ATLDDVLSLTVENILDRRLQTIVFKKNLALSEK 122
Query: 409 HAR 417
AR
Sbjct: 123 QAR 125
>UniRef50_Q8ZTV1 Cluster: 30S ribosomal protein S4P; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S4P -
Pyrobaculum aerophilum
Length = 159
Score = 84.6 bits (200), Expect = 7e-16
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 82 PRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL--TLEEKDPKRLFE 255
P++ + K L +EL+++GEYGLRNK+E+W + L I + AR LL T EE+ P +
Sbjct: 16 PKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEM-- 73
Query: 256 GNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 417
++ ++LD +L L + LERRLQT V++ GLAKSIHHAR
Sbjct: 74 --PFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGLAKSIHHAR 125
>UniRef50_P54020 Cluster: 30S ribosomal protein S4P; n=12;
Archaea|Rep: 30S ribosomal protein S4P - Methanococcus
jannaschii
Length = 187
Score = 84.2 bits (199), Expect = 1e-15
Identities = 46/119 (38%), Positives = 67/119 (56%)
Frame = +1
Query: 61 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 240
F KTY TP P+ K R+++E ++ +YGLR KREVW+ + L + R+ AR L++ ++
Sbjct: 8 FKKTYETPNHPWIKERIEREKELCRKYGLRRKREVWKAETILRKYRRQARRLIS--DRTE 65
Query: 241 KRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 417
+ E + LD VL L +ED LERRLQT VF+ GLA++ AR
Sbjct: 66 QGAKEAVQLFNVLKKYGILKIENPTLDDVLSLTVEDILERRLQTLVFRKGLARTPRQAR 124
>UniRef50_Q0W1V5 Cluster: 30S ribosomal protein S4P; n=1; uncultured
methanogenic archaeon RC-I|Rep: 30S ribosomal protein
S4P - Uncultured methanogenic archaeon RC-I
Length = 205
Score = 81.0 bits (191), Expect = 9e-15
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 231
P K Y TP P++KAR+D+E ++ +YGLRNK+ VW+ L + R AR LL +
Sbjct: 4 PGQAKKLYDTPNHPWQKARIDEETSLVKKYGLRNKKSVWKHASDLRKYRSNARALLGVMS 63
Query: 232 ----KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 399
+ ++ KL+ VL LK++D +ERRLQT +++ G A
Sbjct: 64 AGNLPEDSHYIRDAQNIVKKLQTLGILKEDAKLEDVLALKVDDIMERRLQTIIYRKGFAN 123
Query: 400 SIHHAR 417
SI AR
Sbjct: 124 SIKQAR 129
>UniRef50_Q8PV18 Cluster: 30S ribosomal protein S4P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S4P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 219
Score = 80.6 bits (190), Expect = 1e-14
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLT-LE 228
P SK+Y TPR P+++AR+ E++++ YGLRNK+EVW+ L R AR+LL +
Sbjct: 4 PGKKSKSYETPRHPWQEARMAAEVQLVKAYGLRNKKEVWKAASMLRMYRSEARKLLAQVA 63
Query: 229 EKDPKRLFEGN-----AXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 393
+ EG+ + +D +L LK E+ LERRLQTQV + GL
Sbjct: 64 SGGQEGELEGHYATQSEEILSKLIRYGIIKADANVDDILSLKTENILERRLQTQVLRLGL 123
Query: 394 AKSIHHAR 417
A+++ AR
Sbjct: 124 ARTVIQAR 131
>UniRef50_Q3LWD1 Cluster: Ribosomal protein S9; n=1; Bigelowiella
natans|Rep: Ribosomal protein S9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 180
Score = 79.8 bits (188), Expect = 2e-14
Identities = 40/120 (33%), Positives = 68/120 (56%)
Frame = +1
Query: 61 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDP 240
+SK + P+ P+EK RL E+++I +GL+NKRE+WR ++ L+++RK A +L+ + K
Sbjct: 10 YSKIWNRPKNPYEKLRLCNEIRMINLFGLKNKRELWRTQFFLSKLRKVAEKLIYKKAKLE 69
Query: 241 KRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 420
K + + L+ ++ + + L RRLQT V + L+K+IH ARI
Sbjct: 70 KIPSQSYGILWFCYKYNFMNNMTFCLESIIKIDLRSILSRRLQTVVKQLKLSKTIHEARI 129
>UniRef50_Q96YV8 Cluster: 30S ribosomal protein S4P; n=2;
Sulfolobaceae|Rep: 30S ribosomal protein S4P -
Sulfolobus tokodaii
Length = 177
Score = 79.4 bits (187), Expect = 3e-14
Identities = 44/122 (36%), Positives = 66/122 (54%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 231
P + + P P+ + L++E +IG+YGLRNKRE+W + + + R AR LL L
Sbjct: 4 PKKSRRKWEGPGHPWIRINLEKEQVLIGKYGLRNKRELWLAQTIIRKFRHQARSLLALPP 63
Query: 232 KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 411
+ R ++ LD +LGL E++LERRLQT V+K GLA++I+
Sbjct: 64 AE--RSTREKQLIQKLYRMGIIEKDNATLDDILGLNEENYLERRLQTIVYKKGLARTIYQ 121
Query: 412 AR 417
AR
Sbjct: 122 AR 123
>UniRef50_A6UW05 Cluster: Ribosomal protein S4; n=1; Methanococcus
aeolicus Nankai-3|Rep: Ribosomal protein S4 -
Methanococcus aeolicus Nankai-3
Length = 177
Score = 77.0 bits (181), Expect = 1e-13
Identities = 44/122 (36%), Positives = 65/122 (53%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 231
P SKTY TP P+ R+ QE ++ +YGL NK+E+W+++ L R+ AR+L++
Sbjct: 4 PRRLSKTYDTPNHPWIGERIKQERELSNKYGLSNKKEIWKMETRLRTFRRQARKLISDTS 63
Query: 232 KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 411
++ E ++ LD VL L +E LERRLQT VF+ GLA +
Sbjct: 64 AQGEK--EAVQLFGILNRYGILLKEDATLDDVLSLNLESILERRLQTLVFRKGLANTPKQ 121
Query: 412 AR 417
AR
Sbjct: 122 AR 123
>UniRef50_Q9HQJ6 Cluster: 30S ribosomal protein S4P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S4P -
Halobacterium salinarium (Halobacterium halobium)
Length = 170
Score = 74.5 bits (175), Expect = 8e-13
Identities = 43/123 (34%), Positives = 64/123 (52%)
Frame = +1
Query: 49 VPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLE 228
+P +K Y TP P++ R+ +E ++ YGL+NK E+WR + L R+ AR LL
Sbjct: 3 LPGENTKFYETPNHPYQGERIAEESDLLSRYGLKNKEELWRAQSELRDYRREARRLL--- 59
Query: 229 EKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIH 408
G E++ +LD VL L++ D LERRLQT V++ GLA ++
Sbjct: 60 --GQTGTVSGEEFVARLQRIGILSEEE-RLDDVLSLEVTDVLERRLQTVVYREGLANTMG 116
Query: 409 HAR 417
AR
Sbjct: 117 QAR 119
>UniRef50_Q2NFZ4 Cluster: 30S ribosomal protein S4P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 182
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/118 (33%), Positives = 61/118 (51%)
Frame = +1
Query: 67 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 246
K Y TP P+ R+ +E ++ +YGL+NK+E+W+ + + R R+ AR +L + D
Sbjct: 9 KQYDTPSHPWNADRIKEENRLANKYGLKNKKEIWKAESRVKRYRRDARIILGM---DIDE 65
Query: 247 LFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARI 420
+ KL+ VL L +ED L RRLQ+ VFK GL+ + AR+
Sbjct: 66 RADKEKELLDHLVRAGFISPNAKLEEVLDLNVEDILRRRLQSLVFKRGLSHTAKEARL 123
>UniRef50_Q6CM19 Cluster: Similarity; n=2; Saccharomycetaceae|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 246
Score = 70.1 bits (164), Expect = 2e-11
Identities = 39/123 (31%), Positives = 72/123 (58%)
Frame = -3
Query: 420 DAGMMD*LRKTSLEHLSLKTALQEVLNLQTEHIIQFHLFLIKHSDPNQTT**SIAFKQSL 241
D+ +++ L +T L L L+++ QE+ NLQ++ IIQ L + ++ +Q++ SI F+QSL
Sbjct: 65 DSSVVNRLGQTQLVDLGLQSSFQEIFNLQSQDIIQLLLVFRQDTNSHQSSDQSITFEQSL 124
Query: 240 RILLLECQQFTGSLTDASERVLDAPHFTLVAETILSDDLQLLIKTRLLERTSRSYVCFGK 61
+L + QQ +G +D + ++ +F+LV +T+ + LQ ++T R+ S V G
Sbjct: 125 WVLFVSGQQISGGSSDLRQLERNSVNFSLVLQTVFTSQLQFGVQTSGFVRSLWSRVSLGV 184
Query: 60 YRW 52
W
Sbjct: 185 SSW 187
>UniRef50_Q74NF7 Cluster: 30S ribosomal protein S4P; n=5;
Archaea|Rep: 30S ribosomal protein S4P - Nanoarchaeum
equitans
Length = 180
Score = 70.1 bits (164), Expect = 2e-11
Identities = 40/112 (35%), Positives = 62/112 (55%)
Frame = +1
Query: 82 PRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGN 261
P P++K RL E +++ EYGL+NKRE+W + T+AR +A L ++ + + E
Sbjct: 11 PSHPWQKQRLIIEKRLMKEYGLKNKRELW-IAETIARKWRAYARYLNAKQAAGQDISEEK 69
Query: 262 AXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 417
+ +LD VL L ++D LERRLQT + + GLAK++ AR
Sbjct: 70 ERFLTKLKKLGVLSENAELDDVLDLTVKDVLERRLQTMLVRKGLAKTMKQAR 121
>UniRef50_UPI0000501C59 Cluster: UPI0000501C59 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000501C59 UniRef100 entry -
Rattus norvegicus
Length = 199
Score = 67.7 bits (158), Expect = 9e-11
Identities = 44/92 (47%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Frame = +1
Query: 160 EVWRVKYTLARIRKAARE-LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMK------L 318
EVWRVK+TL +IRKA E LL L EKDP+ LFE N E +MK
Sbjct: 41 EVWRVKFTLTKIRKAFWELLLLLNEKDPRYLFEDNLLLRQLVHTGLLGEGKMKPRRSWFT 100
Query: 319 DYVLGLKIEDFLERRLQTQVFKAGLAKSIHHA 414
+ GL+I F E++LQTQVF+ L KSI HA
Sbjct: 101 SWAFGLRIY-FSEKQLQTQVFELVLDKSIRHA 131
>UniRef50_A0RY02 Cluster: 30S ribosomal protein S4P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S4P -
Cenarchaeum symbiosum
Length = 205
Score = 64.9 bits (151), Expect = 6e-10
Identities = 39/111 (35%), Positives = 56/111 (50%)
Frame = +1
Query: 52 PSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEE 231
P + + + P+RPF +EL+ +G +GLR KRE+W+ L+R+R AR LL L +
Sbjct: 4 PKLPRRMWRKPKRPFNYDLKMEELRTLGTFGLRTKRELWKAHTELSRVRNQARSLLALGQ 63
Query: 232 KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFK 384
+ +R K LD VL L++ D L RRLQT V K
Sbjct: 64 EVRER---KEPVLLRSLARIGLVGKDASLDDVLNLQVNDLLGRRLQTIVMK 111
>UniRef50_A6MWA4 Cluster: Ribosomal subunit protein S9; n=3;
Eutheria|Rep: Ribosomal subunit protein S9 - Trichechus
manatus latirostris
Length = 30
Score = 59.7 bits (138), Expect = 2e-08
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = +1
Query: 163 VWRVKYTLARIRKAARELLTLEEKDPKRLF 252
VWRVK+TLA+IRKAARELLTL+EKDP+RLF
Sbjct: 1 VWRVKFTLAKIRKAARELLTLDEKDPRRLF 30
>UniRef50_A0SNY6 Cluster: Ribosomal protein small subunit S9; n=1;
uncultured euryarchaeote ARMAN-2|Rep: Ribosomal protein
small subunit S9 - uncultured euryarchaeote ARMAN-2
Length = 187
Score = 59.7 bits (138), Expect = 2e-08
Identities = 39/117 (33%), Positives = 58/117 (49%)
Frame = +1
Query: 67 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 246
+ Y P+ + AR+ + +I EYGL N E+W+V+ ++R+R R LL+
Sbjct: 9 RKYDKPKDIWNLARIKADNALIAEYGLANMHELWKVQSEISRLRGNVRVLLSGSSS---- 64
Query: 247 LFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 417
+ + E L+ VL + FLERRLQT VFK GLA++I AR
Sbjct: 65 -HDTSDKIIARMVKFGILENGATLEKVLDITPNAFLERRLQTVVFKKGLARTIKQAR 120
>UniRef50_Q9SZ81 Cluster: Putative ribosomal protein; n=1;
Arabidopsis thaliana|Rep: Putative ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 106
Score = 54.4 bits (125), Expect = 9e-07
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +1
Query: 298 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSI 405
D ++ KLDYVL L +E+FLERRLQT VFK+G+AKSI
Sbjct: 17 DSEKNKLDYVLALTVENFLERRLQTIVFKSGMAKSI 52
>UniRef50_Q011L4 Cluster: Chromosome 09 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 09 contig 1, DNA
sequence - Ostreococcus tauri
Length = 293
Score = 50.0 bits (114), Expect = 2e-05
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = -3
Query: 264 SIAFKQSLRILLLECQQFTGSLTDASERVLDAPHFTLVAETILSDDLQLLIKTRLLERTS 85
S+ + +LR+LL++ +Q + + + L AP +LVA+ L+DDLQL ++ LLERTS
Sbjct: 136 SLTLEDALRVLLIKRKQHASGVAELVKGELHAPQLSLVAKAELTDDLQLGVEAILLERTS 195
Query: 84 R 82
R
Sbjct: 196 R 196
>UniRef50_A5BYX8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 187
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = +1
Query: 61 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELL 219
+ KT+ R + K LD ELK IG Y LR KRE+W V+ +LA ++K L+
Sbjct: 119 YGKTFKESRSSYGKGFLDAELKFIGGYELRCKRELWSVQMSLAALQKYFSSLM 171
>UniRef50_Q8SRU8 Cluster: U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN; n=1;
Encephalitozoon cuniculi|Rep: U3 SMALL NUCLEOLAR
RIBONUCLEOPROTEIN - Encephalitozoon cuniculi
Length = 180
Score = 34.7 bits (76), Expect = 0.79
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 130 IGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 246
I +YGLR++ E + + ++RK A L L+E DP R
Sbjct: 32 IAKYGLRDREEYTKYSRIVGKVRKLAEALARLKESDPVR 70
>UniRef50_Q2UJB9 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 950
Score = 33.9 bits (74), Expect = 1.4
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -2
Query: 415 GHDGLTSQDQP*TPESEDGAPRSPQSSNRAHNPVSSVSHQALRP*PDDVVEHCLQTIS*D 236
GHD + + + P D +P S +H P S+ H P D + + ++ S +
Sbjct: 583 GHDNQSHEIESPKPTGADSSPHEDPSREDSHGPSSTPVHGQPEPTGVDGIHNQEESSSHE 642
Query: 235 PS--PRVSTVHGQP 200
S P + VHGQP
Sbjct: 643 DSHGPSSTPVHGQP 656
>UniRef50_Q4P328 Cluster: Helicase SWR1; n=1; Ustilago maydis|Rep:
Helicase SWR1 - Ustilago maydis (Smut fungus)
Length = 1830
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 97 EKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRL 249
EK ++ L+ + ++ LR + WR+ + R RKAA E E+ D ++L
Sbjct: 615 EKKAEERRLRALAKWTLREVLKQWRLAVNVVRARKAAAEKAEKEKSDKEQL 665
>UniRef50_A0BWL3 Cluster: Chromosome undetermined scaffold_132, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_132, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1572
Score = 33.1 bits (72), Expect = 2.4
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = -3
Query: 393 KTSLEHLSLKTALQEVLNLQTEHIIQ-FHLFLIKHSDPNQTT**SIAFKQSLRILLLECQ 217
+ L H L T LQE+ NL E I++ H F+ Q+ + L + L CQ
Sbjct: 999 REKLHHSELTTLLQELQNLINEPIVESLHGFVSLIQCVYQSE--YADLNRVLTLFQLICQ 1056
Query: 216 QFTGSLTDASERVLDAPHFTLVAETILSDDLQLLIK 109
Q GS ++ + L+A+ LSD L++L++
Sbjct: 1057 QGAGSSSEELINSNLSKAMDLLAQNNLSDSLEILLE 1092
>UniRef50_A0B7K6 Cluster: Thiamine biosynthesis protein; n=1;
Methanosaeta thermophila PT|Rep: Thiamine biosynthesis
protein - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 335
Score = 32.3 bits (70), Expect = 4.2
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 22 ELAKMVNNRVPSVFSKTY-VTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIR 198
ELA+ + S+ S+ P++P +ARL++ L+I GE GLR+ + RIR
Sbjct: 275 ELARRIGTYDISIGSQQCRAAPKKPVTRARLEEILRIEGELGLRDLAMELADGVEIVRIR 334
Query: 199 K 201
+
Sbjct: 335 R 335
>UniRef50_Q8RE43 Cluster: 30S ribosomal protein S4; n=6;
Bacteria|Rep: 30S ribosomal protein S4 - Fusobacterium
nucleatum subsp. nucleatum
Length = 195
Score = 32.3 bits (70), Expect = 4.2
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 298 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 417
+E KL V GL + ++LERRL+ V++ G AK+ AR
Sbjct: 69 EEAARKLG-VTGLTLIEYLERRLENVVYRLGFAKTRRQAR 107
>UniRef50_Q6MIP0 Cluster: 30S ribosomal protein S4 B; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S4
B - Bdellovibrio bacteriovorus
Length = 208
Score = 32.3 bits (70), Expect = 4.2
Identities = 36/113 (31%), Positives = 50/113 (44%)
Frame = +1
Query: 79 TPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEG 258
TPR ++ RL EL +G+ G +R ++ L R RK + L LEEK R G
Sbjct: 7 TPRFKRQR-RLLTELPGMGKAGALERRPYPPGQHGLQR-RKYSEFALQLEEKQKLRFHYG 64
Query: 259 NAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 417
+K ++V L + LE+RL VF+ G A SI AR
Sbjct: 65 -LREEQFRRLINKAKKSKATNWVEALV--NLLEKRLDNVVFRLGFASSIPAAR 114
>UniRef50_A3X9S8 Cluster: Sensor protein; n=2; Roseobacter|Rep:
Sensor protein - Roseobacter sp. MED193
Length = 778
Score = 31.9 bits (69), Expect = 5.6
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 261 IAFKQSLRILLLECQQFTGSLTDA-SERVLDAPHFTLVAETILSDDLQLL 115
I +Q +L+E +QF GS+ DA S R+L+A + + + S D +LL
Sbjct: 106 IIIEQDTNAVLIEVKQFVGSMVDAESLRILEATRASALMVSTFSADGELL 155
>UniRef50_A1VAB9 Cluster: DegT/DnrJ/EryC1/StrS aminotransferase;
n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
DegT/DnrJ/EryC1/StrS aminotransferase - Desulfovibrio
vulgaris subsp. vulgaris (strain DP4)
Length = 392
Score = 31.9 bits (69), Expect = 5.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 103 ARLDQELKIIGEYGLRNKREVWRVKYTLA 189
A L Q ++++ YG+ + RE+W+ +YT A
Sbjct: 203 ADLAQRMRVLSMYGISDAREIWQKRYTRA 231
>UniRef50_A7M543 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 918
Score = 31.5 bits (68), Expect = 7.4
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 151 NKREVWRVKYTLARIRKAARELLTLEEKDPK 243
+KR + K+T++R+R+ EL++ EE+DP+
Sbjct: 673 DKRVKYYSKFTISRLREGRPELISYEEQDPR 703
>UniRef50_Q8F458 Cluster: Putative uncharacterized protein; n=4;
Leptospira|Rep: Putative uncharacterized protein -
Leptospira interrogans
Length = 395
Score = 31.1 bits (67), Expect = 9.7
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = -3
Query: 384 LEHLSLKTALQEVLNLQTEHIIQFHLFLIKHSDPNQTT**SIAFKQS----LRILLLECQ 217
L+ +KTAL+++ NL+ E + +FHL S I F++S L++LLL
Sbjct: 177 LDIRQIKTALKKLRNLRKEGVSEFHLPKTIDSTCKNAGDIQIEFERSRKNGLKVLLL--M 234
Query: 216 QFTGSLTDASERV 178
GS+T +ERV
Sbjct: 235 DTGGSMTSHAERV 247
>UniRef50_Q2S493 Cluster: ISSru4, transposase; n=1; Salinibacter
ruber DSM 13855|Rep: ISSru4, transposase - Salinibacter
ruber (strain DSM 13855)
Length = 297
Score = 31.1 bits (67), Expect = 9.7
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 243 LRILLLECQQFTGSLTDASERVL--DAPHFTLVAETILSDDLQLLIKTRLLERTSRSYVC 70
+RI L CQ++ G L +A++R D P FT E +L+ + LIK R YV
Sbjct: 8 IRIYLFICQRYRGRLAEAAQRQSNNDQPDFT--DEEVLTIYVFGLIKKRTTISEIHKYVE 65
Query: 69 FGKYRWYP 46
W+P
Sbjct: 66 DHFSEWFP 73
>UniRef50_Q2J784 Cluster: RNA polymerase sigma factor; n=6;
Actinomycetales|Rep: RNA polymerase sigma factor -
Frankia sp. (strain CcI3)
Length = 422
Score = 31.1 bits (67), Expect = 9.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 370 SEDGAPRSPQSSNRAHNPVSSVSHQALRP*PDDVVE 263
++D PRSP+ + RA PV + ++L PDD E
Sbjct: 12 TDDNRPRSPRRARRAAPPVRTAPSRSLAAVPDDTDE 47
>UniRef50_A4C1Y1 Cluster: Putative outer membrane protein; n=1;
Polaribacter irgensii 23-P|Rep: Putative outer membrane
protein - Polaribacter irgensii 23-P
Length = 591
Score = 31.1 bits (67), Expect = 9.7
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +1
Query: 163 VWRVKYTLARIRKAARELLTLEEKDPK 243
+W++ Y++ +I A +LT+EE+D +
Sbjct: 115 IWKINYSIEKIASAPENILTVEERDER 141
>UniRef50_Q4DJR5 Cluster: Phosphatidylinositol kinase domain protein,
putative; n=5; Trypanosoma|Rep: Phosphatidylinositol
kinase domain protein, putative - Trypanosoma cruzi
Length = 4234
Score = 31.1 bits (67), Expect = 9.7
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 294 HSDPNQTT**SIAFKQSLRILLLECQQFTGSLTDASERVLDAPHFTLVAETILSDD 127
HS+ + SI +R+ L + QQ + L+DA +R+L TL ET +D
Sbjct: 3514 HSEEYRKLQESIGASHRIRVELEQQQQMSDGLSDAEKRILQRRIRTLAVETTREED 3569
>UniRef50_Q1E4I6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 690
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 388 QP*TPESEDGAPRSPQSSNRAHNPVSSVSHQAL-RP*PDDVVEHCL 254
+P + G R+P +S+ HNP+SS+S + L + P + HCL
Sbjct: 454 EPVSTSPSPGVLRAPHNSDSVHNPLSSLSPETLAKVKPILLTLHCL 499
>UniRef50_Q96XL2 Cluster: Putative uncharacterized protein ST2504;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST2504 - Sulfolobus tokodaii
Length = 509
Score = 31.1 bits (67), Expect = 9.7
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +1
Query: 43 NRVP-SVFSKTYVTPRR-PFEKAR--LDQELKIIGEYGLRNKREVWRVKYTLARIRK 201
N VP ++ ++ Y + P + AR L++ LK++ E G+ K + + + YTL R+ K
Sbjct: 22 NAVPLTIMAEEYAKEKNIPKQSARKVLEKRLKVLVEQGIVEKLKTYPISYTLKRLPK 78
>UniRef50_Q8GXF6 Cluster: F-box/kelch-repeat protein At4g19870; n=2;
Arabidopsis thaliana|Rep: F-box/kelch-repeat protein
At4g19870 - Arabidopsis thaliana (Mouse-ear cress)
Length = 400
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 352 RSPQSSNRAHNPVSSVSHQALRP*PDDVVEHCLQTIS*DPSPRVSTV 212
+ + + A +P S S +L PD++VE+CL IS P +S V
Sbjct: 10 KKTKRTTNASSPTPSSSSPSLSSLPDEIVENCLARISRSYYPTLSIV 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,080,449
Number of Sequences: 1657284
Number of extensions: 7437782
Number of successful extensions: 21729
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 21145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21704
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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