Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F22
         (422 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   221   3e-58
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   221   3e-58
AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   221   3e-58
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   221   3e-58
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   132   1e-31
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   1.5  
AE014298-1625|AAF48047.1|  131|Drosophila melanogaster CG15194-P...    27   7.8  
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB...    27   7.8  
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA...    27   7.8  
AE013599-2760|ABC66051.1|  235|Drosophila melanogaster CG34020-P...    27   7.8  

>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  221 bits (540), Expect = 3e-58
 Identities = 106/129 (82%), Positives = 113/129 (87%)
 Frame = +1

Query: 34  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 213
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 214 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 393
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 394 AKSIHHARI 420
           AKSIHHAR+
Sbjct: 121 AKSIHHARV 129


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  221 bits (540), Expect = 3e-58
 Identities = 106/129 (82%), Positives = 113/129 (87%)
 Frame = +1

Query: 34  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 213
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 214 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 393
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 394 AKSIHHARI 420
           AKSIHHAR+
Sbjct: 121 AKSIHHARV 129


>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  221 bits (540), Expect = 3e-58
 Identities = 106/129 (82%), Positives = 113/129 (87%)
 Frame = +1

Query: 34  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 213
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 214 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 393
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 394 AKSIHHARI 420
           AKSIHHAR+
Sbjct: 121 AKSIHHARV 129


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  221 bits (540), Expect = 3e-58
 Identities = 106/129 (82%), Positives = 113/129 (87%)
 Frame = +1

Query: 34  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 213
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGLRNKREVWRVKY LA+IRKAARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARE 60

Query: 214 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 393
           LLTL+EKD KRLF+GNA           DE +MKLDYVLGLKIEDFLERRLQTQVFK GL
Sbjct: 61  LLTLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGL 120

Query: 394 AKSIHHARI 420
           AKSIHHAR+
Sbjct: 121 AKSIHHARV 129


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  132 bits (320), Expect = 1e-31
 Identities = 73/129 (56%), Positives = 85/129 (65%)
 Frame = +1

Query: 34  MVNNRVPSVFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARE 213
           MVN R+PSVFSKTYVTPRRP+EKARLDQELKIIGEYGL+  R V  VKY LA+IRK ARE
Sbjct: 1   MVNGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARE 59

Query: 214 LLTLEEKDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGL 393
           LLTL+EKD KRLF+G +            +   +     G +    L         +AGL
Sbjct: 60  LLTLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQAGL 118

Query: 394 AKSIHHARI 420
           AKSIHHAR+
Sbjct: 119 AKSIHHARV 127



 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +3

Query: 312 ETGLCARFED*GLLGAPSSDSGVQ 383
           E  L A  ED GLLGA S+D+GVQ
Sbjct: 92  EARLRAGSEDSGLLGASSADAGVQ 115


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 345  GLLGAPSSDSGVQGWSCEVNPSCPH 419
            GL G P+S  G  G+ C+V+  CP+
Sbjct: 9018 GLSGDPTSVIGCHGYECQVDADCPN 9042


>AE014298-1625|AAF48047.1|  131|Drosophila melanogaster CG15194-PA
           protein.
          Length = 131

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 84  RSYVCFGKYRWYPVVHHLGELVSIRASC 1
           RS  C+   +W   ++H+G LVS+   C
Sbjct: 49  RSTACWQSMKWKSALNHIGLLVSLSIYC 76


>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
            isoform B protein.
          Length = 3313

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 400  TSQDQP*TPESEDGAPRSPQSSNRAHNPVSSVSHQALRP*PDDVVEHCLQ 251
            + QDQ  + E +  A     S  R   P+SS  + AL+   DD VE  L+
Sbjct: 883  SQQDQSVSEELDILAKNRRMSGTRIKTPISSTGNPALKRRADDDVEDKLE 932


>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
            isoform A protein.
          Length = 3313

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 400  TSQDQP*TPESEDGAPRSPQSSNRAHNPVSSVSHQALRP*PDDVVEHCLQ 251
            + QDQ  + E +  A     S  R   P+SS  + AL+   DD VE  L+
Sbjct: 883  SQQDQSVSEELDILAKNRRMSGTRIKTPISSTGNPALKRRADDDVEDKLE 932


>AE013599-2760|ABC66051.1|  235|Drosophila melanogaster CG34020-PA
           protein.
          Length = 235

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -2

Query: 400 TSQDQP*TPESEDGAPRSPQSSNRAHNPVSSVSHQALRP*PDDVVEHCLQ 251
           TSQ QP T E++D A  S  SS    N      +QA    PD   E  L+
Sbjct: 59  TSQSQPSTEETDDDAEDSCSSS--GSNQTGITVYQADETQPDTQAEQILE 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,114,567
Number of Sequences: 53049
Number of extensions: 354250
Number of successful extensions: 1154
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)