Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F18
         (180 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   1.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   1.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   1.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   4.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           19   6.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    18   8.1  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    18   8.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    18   8.1  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 4/11 (36%), Positives = 10/11 (90%)
 Frame = -1

Query: 54  WFPYFVCLLIC 22
           ++ YF+C+++C
Sbjct: 157 YYTYFLCVIVC 167


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 157 RNYRYGMR--TGARRTSLYELCLQPAPLLTPPK 65
           +++ YG R  +G+  +S+ E C      LTP +
Sbjct: 796 QSHHYGRRERSGSESSSISERCSSRVESLTPER 828


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.6 bits (41), Expect(2) = 1.3
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 138 CVPAHDALHFTNCACNPRPSLRPRKRHTWF 49
           C+   + + F  C C    S+RP     WF
Sbjct: 542 CLIQFNTIVFAFCYCYYSISIRPISTLGWF 571



 Score = 18.2 bits (35), Expect(2) = 1.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 156 ETIDTVCVPAHDAL 115
           E I  +C+ +HD L
Sbjct: 510 EQIVDICIRSHDKL 523


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
          transcriptase andRNase H protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 68 RGRKEGRGLQ 97
          RGR  GRGL+
Sbjct: 11 RGRSTGRGLK 20


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -2

Query: 113 TLRT-VPATRAPPYAPENDTHG 51
           TLR  +PA+ A  +AP+  + G
Sbjct: 107 TLRQHIPASVAAAFAPQGPSTG 128


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 45  YFVCLLICSSIT 10
           YF+ L ICS  T
Sbjct: 442 YFLRLAICSRFT 453


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
          protein.
          Length = 126

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 88 APLLTPP 68
          +PLLTPP
Sbjct: 16 SPLLTPP 22


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
          protein protein.
          Length = 371

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 95 ATRAPPYAP 69
          A   PPYAP
Sbjct: 71 APHGPPYAP 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,124
Number of Sequences: 336
Number of extensions: 903
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 39
effective length of database: 109,481
effective search space used:  2189620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)