Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F18
         (180 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063297-1|AAH63297.1|  432|Homo sapiens ring finger protein 44 ...    28   6.2  
BC039833-1|AAH39833.1|  432|Homo sapiens ring finger protein 44 ...    28   6.2  
AB029023-1|BAA83052.2|  444|Homo sapiens KIAA1100 protein protein.     28   6.2  
AB209814-1|BAD93051.1|  602|Homo sapiens ALPL protein variant pr...    27   8.2  

>BC063297-1|AAH63297.1|  432|Homo sapiens ring finger protein 44
           protein.
          Length = 432

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 97  LQPAPLLTPPKTTHMVPILCLFVNLFVDH 11
           L P P   PP+ THM P L  FV+L   H
Sbjct: 183 LHPPPPAPPPQPTHMAP-LGQFVSLQTQH 210


>BC039833-1|AAH39833.1|  432|Homo sapiens ring finger protein 44
           protein.
          Length = 432

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 97  LQPAPLLTPPKTTHMVPILCLFVNLFVDH 11
           L P P   PP+ THM P L  FV+L   H
Sbjct: 183 LHPPPPAPPPQPTHMAP-LGQFVSLQTQH 210


>AB029023-1|BAA83052.2|  444|Homo sapiens KIAA1100 protein protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -3

Query: 97  LQPAPLLTPPKTTHMVPILCLFVNLFVDH 11
           L P P   PP+ THM P L  FV+L   H
Sbjct: 195 LHPPPPAPPPQPTHMAP-LGQFVSLQTQH 222


>AB209814-1|BAD93051.1|  602|Homo sapiens ALPL protein variant
           protein.
          Length = 602

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 108 TNCACNPRPSLRPRKRHTWFPYFVCLLICSSIT 10
           T+  C P PS  PR+ H W P    +L C+ I+
Sbjct: 50  TSDHCQPTPS-HPRRLHLWAPGIKQVLGCTMIS 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,194,574
Number of Sequences: 237096
Number of extensions: 519739
Number of successful extensions: 1361
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 76,859,062
effective HSP length: 39
effective length of database: 67,612,318
effective search space used: 1352246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)