Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F18
         (180 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2664|AAN10926.1|   62|Drosophila melanogaster CG31820-P...    27   2.6  
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P...    26   6.1  
DQ494533-1|ABF29833.1| 2445|Drosophila melanogaster leucine-rich...    26   8.0  
AE014297-2835|AAF55793.2| 2351|Drosophila melanogaster CG5483-PA...    26   8.0  

>AE014134-2664|AAN10926.1|   62|Drosophila melanogaster CG31820-PA
           protein.
          Length = 62

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 132 PAHDALHFTNCACNPRPSLRP 70
           PA  A+++ NC C P P   P
Sbjct: 21  PALPAMNYNNCCCGPNPPCGP 41


>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
           protein.
          Length = 1377

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 136 RTGARRTSLYELCLQPAPLLTPPKTTHMVP 47
           R+  RRTS+   CLQ AP   P +T   +P
Sbjct: 461 RSKIRRTSVGVQCLQHAPATGPWQTVQSLP 490


>DQ494533-1|ABF29833.1| 2445|Drosophila melanogaster leucine-rich
            repeat kinase protein.
          Length = 2445

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 171  FANIIETIDTVCVPAHDALHFTNCACNPRPSLRPRK 64
            F + I+ +D  C P+   L   + +C+P+P + P K
Sbjct: 2070 FGSRIDILD--CSPSGSLLQCNSISCSPQPQVAPPK 2103


>AE014297-2835|AAF55793.2| 2351|Drosophila melanogaster CG5483-PA
            protein.
          Length = 2351

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 171  FANIIETIDTVCVPAHDALHFTNCACNPRPSLRPRK 64
            F + I+ +D  C P+   L   + +C+P+P + P K
Sbjct: 1976 FGSRIDILD--CSPSGSLLQCNSISCSPQPQVAPPK 2009


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,953,143
Number of Sequences: 53049
Number of extensions: 162698
Number of successful extensions: 701
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 24,988,368
effective HSP length: 40
effective length of database: 22,866,408
effective search space used: 434461752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)