Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F18
         (180 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   0.048
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   1.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   1.8  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    20   3.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   3.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   3.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   3.1  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    19   5.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   7.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   7.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    18   9.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 0.048
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -1

Query: 54  WFPYFVCLL---ICSSITASC 1
           W P+F C +   IC+ +TA C
Sbjct: 632 WLPFFTCNIMDAICTKLTADC 652


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 109 YELCLQPAPLLTPPKTTHMVPI 44
           Y + ++  P+LTPP +  + P+
Sbjct: 425 YGIRVERDPILTPPSSNPVSPV 446


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 98  PATRAPPYAPENDTHGSHTL 39
           P  RAP +  EN+T    TL
Sbjct: 112 PRMRAPSFICENETRQGLTL 131


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 60  HTWFPY 43
           HTW+PY
Sbjct: 163 HTWWPY 168


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 95  ATRAPPYAPENDTHGSHTLSV 33
           A  APP  PEN    +  L V
Sbjct: 354 AVPAPPVLPENHLKNAKYLDV 374


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 95  ATRAPPYAPENDTHGSHTLSV 33
           A  APP  PEN    +  L V
Sbjct: 354 AVPAPPVLPENHLKNAKYLDV 374


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 95  ATRAPPYAPENDTHGSHTLSV 33
           A  APP  PEN    +  L V
Sbjct: 354 AVPAPPVLPENHLKNAKYLDV 374


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
          receptor 2 protein.
          Length = 210

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 94 QPAPLLTPPKTTHMV 50
          +P P +TPP+  +M+
Sbjct: 42 EPLPPVTPPQGENML 56


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -1

Query: 111 FTNCACNP 88
           FT C C+P
Sbjct: 293 FTECRCDP 300


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -1

Query: 54  WFPYFVCLLI 25
           W P+FV  L+
Sbjct: 385 WLPFFVLALV 394


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = -1

Query: 114 HFTNCACNPRPSLRPRKRHTWFPYF 40
           H   CA     +L+ R+   WF  F
Sbjct: 26  HKKLCAVYGDEALKERQCQNWFDKF 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,514
Number of Sequences: 438
Number of extensions: 1290
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used:  2585220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)