Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F17
         (255 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   0.78 
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    20   5.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   7.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   7.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    19   7.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   9.6  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 0.78
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -2

Query: 230 IDLFLMIHVFFKIWSSEYFILL 165
           I LF+MI V++KI+ +   I+L
Sbjct: 213 IPLFVMIQVYYKIFCAARRIVL 234


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -2

Query: 197 KIWSSEYFILLGILQVLA 144
           ++W  + FILL ++ ++A
Sbjct: 4   RMWLQQIFILLQMIHLIA 21


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 35  VSFQNYVNTLSSWSI*AFP 91
           V+ Q+Y  TL SW+   FP
Sbjct: 182 VAEQSYGLTLPSWTNNIFP 200


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 35  VSFQNYVNTLSSWSI*AFP 91
           V+ Q+Y  TL SW+   FP
Sbjct: 197 VAEQSYGLTLPSWTNNIFP 215


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 35  VSFQNYVNTLSSWSI*AFP 91
           V+ Q+Y  TL SW+   FP
Sbjct: 85  VAEQSYGLTLPSWTNNIFP 103


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 176  FILLGILQVLAVSNRKQHFGFLTPYQ 99
            FI+   L++    N +   GF+TP++
Sbjct: 962  FIVNSNLRLTFSKNVQGRVGFVTPFE 987


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,724
Number of Sequences: 438
Number of extensions: 1225
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4511484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)