Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F16
(369 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 22 2.3
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 22 2.3
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 3.0
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 4.0
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 21 4.0
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 5.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 9.2
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 20 9.2
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 20 9.2
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 20 9.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 20 9.2
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.8 bits (44), Expect = 2.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 151 IFFSAKNSATCVLLLVCLAMFVRESNARP 237
IF + A ++LLVC + E N+RP
Sbjct: 105 IFLVNLSVADLMVLLVCTPTVLVEVNSRP 133
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 21.8 bits (44), Expect = 2.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 151 IFFSAKNSATCVLLLVCLAMFVRESNARP 237
IF + A ++LLVC + E N+RP
Sbjct: 105 IFLVNLSVADLMVLLVCTPTVLVEVNSRP 133
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.4 bits (43), Expect = 3.0
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 300 FIICMTFS*FC-KDPATGCKPRRSRVRFPNEHRQADEQQY 184
F++C F D + + + R FPN + + Q+Y
Sbjct: 5 FVVCCLLLMFSYTDNVSSTRTKYLRTNFPNFYNDFEVQRY 44
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.0 bits (42), Expect = 4.0
Identities = 5/21 (23%), Positives = 13/21 (61%)
Frame = +1
Query: 262 VFTESAECHTDDELLELCQRC 324
V + + +D++ +++C RC
Sbjct: 218 VVKDKKKSRSDEQTIDICMRC 238
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.0 bits (42), Expect = 4.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 292 DDELLELCQRCAKLTKSKLAYPAC 363
+DE E+ KL++S+L AC
Sbjct: 387 EDERNEIISSALKLSQSELEITAC 410
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.6 bits (41), Expect = 5.3
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = +1
Query: 193 LVCLAMFVRESNARPPWLAPGSGVFTESAECHTDDELLEL 312
L C+ + + + + P L G+ ++AEC ++ EL
Sbjct: 6 LFCVLVTLATARNKAPLLDDGTRTRNKAAECVFGKQVREL 45
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 2 HEGRDRHSTIVESSDKP 52
++ R RHS IVE+ P
Sbjct: 155 YDSRGRHSEIVETVYDP 171
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 130 VVKKMSVIFFSAKNSATCVL 189
++ +S IFF+ N A C L
Sbjct: 164 ILSHLSGIFFTVFNVAQCYL 183
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 254 PGASHGGLAFDSRTNIAR 201
PGA G L+ +T +AR
Sbjct: 99 PGAGSGNLSPQIQTQVAR 116
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 19.8 bits (39), Expect = 9.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 254 PGASHGGLAFDSRTNIAR 201
PGA G L+ +T +AR
Sbjct: 99 PGAGSGNLSPQIQTQVAR 116
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 19.8 bits (39), Expect = 9.2
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -1
Query: 216 NEHRQADEQQYAGC*IFRGEKNHRHFFNH 130
N RQA +QQ + +H H +H
Sbjct: 301 NSQRQAAQQQNNNNAATNNQNHHHHAGHH 329
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,636
Number of Sequences: 336
Number of extensions: 1565
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7616520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -