Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F16
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.070
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   2.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   2.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   2.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   2.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   2.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   6.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   6.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    20   8.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    20   8.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 0.070
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 11  RDRHSTIVESSDKPTTNTHEKKFYS 85
           RD  S +V+    PTT + E++F+S
Sbjct: 484 RDISSLVVQEQPTPTTESEERRFFS 508


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 91  PSEFIVFDY*KNLVVKKMSVIFFSAKNSAT 180
           PS+ +VFD   + ++K++ +    A NS T
Sbjct: 151 PSQIVVFDLKNSKLLKQVKIPHDIAINSTT 180


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 66  CVFVVGLSDDSTIVLCLSRPS 4
           CVF +     +T++LC S PS
Sbjct: 434 CVFFLTTIVSTTVILCGSPPS 454


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 80 RIFSRVCLWSVCQTT 36
          R+F  VCL  VCQ T
Sbjct: 3  RLFMLVCLGIVCQGT 17


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
          protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 80 RIFSRVCLWSVCQTT 36
          R+F  VCL  VCQ T
Sbjct: 3  RLFMLVCLGIVCQGT 17


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
          protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 80 RIFSRVCLWSVCQTT 36
          R+F  VCL  VCQ T
Sbjct: 3  RLFMLVCLGIVCQGT 17


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 101 NSLGTRNRIFSR 66
           NSLG+R+R F R
Sbjct: 215 NSLGSRSRSFQR 226


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 152 FFSPRKIQQPAYCCSSAW 205
           F  P ++  PA CC++ W
Sbjct: 190 FVVPTRV--PATCCTTXW 205


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 59  NTHEKKFYSGYLVN 100
           N + KK Y  Y++N
Sbjct: 110 NNNYKKLYKNYIIN 123


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 59  NTHEKKFYSGYLVN 100
           N + KK Y  Y++N
Sbjct: 110 NNNYKKLYKNYIIN 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,812
Number of Sequences: 438
Number of extensions: 1670
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)