Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F15
(244 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 27 1.8
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 26 4.1
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 26 4.1
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 26 4.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 26 4.1
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 26 4.1
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 26 4.1
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 26 4.1
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 26 4.1
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 25 9.4
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 25 9.4
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 27.1 bits (57), Expect = 1.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 197 YRYPEGFYVVSHLDHEVY 144
Y+ P FY+ +H+D E+Y
Sbjct: 186 YKTPNNFYIFNHVDIEIY 203
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 146 TPHGLDARPHRSPQDTDRHVSGAEAHTDLD 235
T ++ HR Q D SGAE H+ D
Sbjct: 1788 TRRSVEPEEHRHSQHEDHEASGAEQHSGQD 1817
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 146 TPHGLDARPHRSPQDTDRHVSGAEAHTDLD 235
T ++ HR Q D SGAE H+ D
Sbjct: 1794 TRRSVEPEEHRHSQHEDHEASGAEQHSGQD 1823
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 146 TPHGLDARPHRSPQDTDRHVSGAEAHTDLD 235
T ++ HR Q D SGAE H+ D
Sbjct: 1788 TRRSVEPEEHRHSQHEDHEASGAEQHSGQD 1817
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 146 TPHGLDARPHRSPQDTDRHVSGAEAHTDLD 235
T ++ HR Q D SGAE H+ D
Sbjct: 1794 TRRSVEPEEHRHSQHEDHEASGAEQHSGQD 1823
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 146 TPHGLDARPHRSPQDTDRHVSGAEAHTDLD 235
T ++ HR Q D SGAE H+ D
Sbjct: 891 TRRSVEPEEHRHSQHEDHEASGAEQHSGQD 920
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 141 SAPERTAYTSTVNSALLVYLARNSLIKPPPSALATPIVSATAS 13
S ER A STVNS + V PPP+A + P+ +++ S
Sbjct: 259 SLEERPASGSTVNSGIFV---------PPPTAFSPPLTTSSRS 292
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger
protein protein 1,isoform c protein.
Length = 635
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 141 SAPERTAYTSTVNSALLVYLARNSLIKPPPSALATPIVSATAS 13
S ER A STVNS + V PPP+A + P+ +++ S
Sbjct: 27 SLEERPASGSTVNSGIFV---------PPPTAFSPPLTTSSRS 60
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 141 SAPERTAYTSTVNSALLVYLARNSLIKPPPSALATPIVSATAS 13
S ER A STVNS + V PPP+A + P+ +++ S
Sbjct: 259 SLEERPASGSTVNSGIFV---------PPPTAFSPPLTTSSRS 292
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 24.6 bits (51), Expect = 9.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 66 IKPPPSALATPIVSATASCRI 4
+ PPP L+T VSA ASC I
Sbjct: 894 VSPPPPLLSTKYVSA-ASCSI 913
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 36 GWPGQRGE 59
GWPGQRGE
Sbjct: 199 GWPGQRGE 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,102,633
Number of Sequences: 27780
Number of extensions: 86123
Number of successful extensions: 204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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