Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F14
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   2.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   2.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   6.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    20   6.3  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 87  ILF*EVVIANNIDFYQSDNSMKRKRQPSC 1
           I F + +  NNI+ Y+   + KRK    C
Sbjct: 197 ITFDDAINNNNIELYKEIFNGKRKNPNGC 225


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 341 PLQHQENHLYRSATCHLNQH 282
           P Q+Q N  YR+   H  QH
Sbjct: 285 PNQYQMNQEYRTDRKHTQQH 304


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 341 PLQHQENHLYRSATCHLNQH 282
           P Q+Q N  YR+   H  QH
Sbjct: 233 PNQYQMNQEYRTDRKHTQQH 252


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 341 PLQHQENHLYRSATCHLNQH 282
           P Q+Q N  YR+   H  QH
Sbjct: 416 PNQYQMNQEYRTDRKHTQQH 435


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 10/46 (21%), Positives = 19/46 (41%)
 Frame = +3

Query: 192 LLQPHVQLAEALFVNENXXXXXXXPEIAAQVLVQVACGASIQMILL 329
           LL    Q+   +F NE+              +V +  G  ++M+L+
Sbjct: 477 LLSQRHQIDAKMFCNESSVSNCENEYCECTHVVNIPLGTVVEMVLI 522


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 299 CHLNQHLCCDFWLQ 258
           C  N H C DF +Q
Sbjct: 64  CQRNGHNCLDFTVQ 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,514
Number of Sequences: 336
Number of extensions: 1340
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)