Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F13
(196 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 105 6e-25
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 103 3e-24
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 99 4e-23
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 92 1e-20
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 88 2e-19
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 59 9e-11
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 46 7e-07
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 42 9e-06
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 25 1.8
SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 23 7.4
SPBC3B9.08c |||Mago-nashi homolog|Schizosaccharomyces pombe|chr ... 23 7.4
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 105 bits (253), Expect = 6e-25
Identities = 49/58 (84%), Positives = 55/58 (94%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRDGEKNVLV 195
VTHAVVTVPAYFNDAQRQATKDAG IAGLNV+RI+NEPTAAAIAYGL+K D EK+++V
Sbjct: 170 VTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEKHIVV 227
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 103 bits (247), Expect = 3e-24
Identities = 50/61 (81%), Positives = 56/61 (91%), Gaps = 1/61 (1%)
Frame = +1
Query: 16 GKVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEK-RDGEKNVL 192
GKVT AVVTVPAYFND+QRQATKDAG+IAGLNV+RIINEPTAAAIAYGL++ GE NVL
Sbjct: 135 GKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVL 194
Query: 193 V 195
+
Sbjct: 195 I 195
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 99 bits (238), Expect = 4e-23
Identities = 49/61 (80%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
Frame = +1
Query: 16 GKVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEK-RDGEKNVL 192
GKVT AVVTVPAYFND+QRQATKDAG+IAGLNV+RIINEPTAAAIAYGL++ E NVL
Sbjct: 135 GKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVL 194
Query: 193 V 195
+
Sbjct: 195 I 195
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 91.9 bits (218), Expect = 1e-20
Identities = 45/60 (75%), Positives = 52/60 (86%), Gaps = 1/60 (1%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLE-KRDGEKNVLV 195
+V AV+TVPAYF+D+QR ATKDAG IAGLNV+RIINEPTAAAIAYGL+ K D KNVL+
Sbjct: 140 RVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLI 199
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 87.8 bits (208), Expect = 2e-19
Identities = 39/51 (76%), Positives = 48/51 (94%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRD 174
V +AVVTVPAYFND+QRQATK AG IAGLNV+R++NEPTAAA+AYGL+K++
Sbjct: 183 VKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKKN 233
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 58.8 bits (136), Expect = 9e-11
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +1
Query: 16 GKVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRD 174
G V+ V+++PA+F D QR+A +A IAGLN +R++N+ AAA+ YG+ K D
Sbjct: 139 GSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTD 191
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 46.0 bits (104), Expect = 7e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIA 153
KV V++VP YF DAQR+A + A AGL V+++I++P A +A
Sbjct: 162 KVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILA 206
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 42.3 bits (95), Expect = 9e-06
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 10 ARGKVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEK 168
A K+T V+TVP +FN+ QR +A I +V+ +I++ A AI Y L +
Sbjct: 156 AHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSR 208
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 84 FSGLALGVVEVSRYSYNSMSNFPSCR 7
FSG A + +S YS S S+FPS +
Sbjct: 716 FSGQAFTGMGLSNYSLMSSSSFPSAQ 741
>SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 629
Score = 22.6 bits (46), Expect = 7.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 39 NCTCLLQRRPAPG 77
NC CL + P+PG
Sbjct: 390 NCVCLNEDHPSPG 402
>SPBC3B9.08c |||Mago-nashi homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 147
Score = 22.6 bits (46), Expect = 7.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 135 RLIDDSHYIKTSDDT 91
R++DDS IK SD++
Sbjct: 61 RIVDDSEIIKESDES 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,235
Number of Sequences: 5004
Number of extensions: 9291
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 2,362,478
effective HSP length: 44
effective length of database: 2,142,302
effective search space used: 42846040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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