Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F13
(196 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 107 8e-25
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 107 8e-25
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 105 3e-24
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 99 5e-22
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 97 2e-21
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 93 2e-20
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 91 8e-20
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 90 2e-19
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 90 2e-19
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 89 3e-19
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 75 9e-15
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 75 9e-15
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 62 4e-11
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 60 2e-10
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 53 3e-08
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 52 7e-08
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 52 7e-08
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 26 3.2
Z11126-9|CAA77475.2| 246|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z11115-21|CAA77461.2| 246|Caenorhabditis elegans Hypothetical p... 25 5.6
Z11115-19|CAA77457.2| 246|Caenorhabditis elegans Hypothetical p... 25 5.6
L25598-1|AAA27942.1| 129|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 25 9.8
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 107 bits (258), Expect = 8e-25
Identities = 50/59 (84%), Positives = 57/59 (96%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRDGEKNVLV 195
+V +AVVTVPAYFNDAQRQATKDAG IAGLNV+RIINEPTAAAIAYGL+K+DGE+N+LV
Sbjct: 169 EVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDGERNILV 227
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 107 bits (258), Expect = 8e-25
Identities = 50/59 (84%), Positives = 57/59 (96%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRDGEKNVLV 195
+V +AVVTVPAYFNDAQRQATKDAG IAGLNV+RIINEPTAAAIAYGL+K+DGE+N+LV
Sbjct: 169 EVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKKDGERNILV 227
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 105 bits (253), Expect = 3e-24
Identities = 49/59 (83%), Positives = 57/59 (96%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRDGEKNVLV 195
+V +AVVTVPAYFNDAQ+QATKDAG IAGLNV+RIINEPTAAAIAYGL+K+DGE+N+LV
Sbjct: 166 EVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDKKDGERNILV 224
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 98.7 bits (235), Expect = 5e-22
Identities = 48/59 (81%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKR-DGEKNVLV 195
V AVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL+K+ GE+NVL+
Sbjct: 140 VKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLI 198
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 97.1 bits (231), Expect = 2e-21
Identities = 47/59 (79%), Positives = 53/59 (89%), Gaps = 1/59 (1%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKR-DGEKNVLV 195
V AVVTVP YFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL+K+ GE+NVL+
Sbjct: 140 VKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDKKGHGERNVLI 198
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 93.5 bits (222), Expect = 2e-20
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRDGEKNVLV 195
V +AVVTVPAYFND+QRQATKDAG I+GLNV+R+INEPTAAA+AYGL+K G+K + V
Sbjct: 164 VNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKDAGDKIIAV 221
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 91.5 bits (217), Expect = 8e-20
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRDGEKNVLV 195
V + VVTVPAYFND+QRQATKDAG I+GLNV+R+INEPTAAA+AYGL+K G+K + V
Sbjct: 164 VNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKDAGDKIIAV 221
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 90.2 bits (214), Expect = 2e-19
Identities = 44/59 (74%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKR-DGEKNVLV 195
V AV+TVPAYFND+QRQATKDA IAGLN +RIINEPTAAA+AYGL+K EKNVL+
Sbjct: 139 VKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKNVLI 197
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 90.2 bits (214), Expect = 2e-19
Identities = 44/59 (74%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKR-DGEKNVLV 195
V AV+TVPAYFND+QRQATKDA IAGLN +RIINEPTAAA+AYGL+K EKNVL+
Sbjct: 139 VKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGIQDEKNVLI 197
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 89.4 bits (212), Expect = 3e-19
Identities = 43/59 (72%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKR-DGEKNVLV 195
V AV+TVPAYFND+QRQATKDA IAGLN +RIINEPTAAA+AYGL+K EKN+L+
Sbjct: 139 VRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLDKGITDEKNILI 197
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 74.5 bits (175), Expect = 9e-15
Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLE-KRDGEKNVLV 195
+V AV+TVPAYFN QR+AT++A IAGL V+RI+NEPTAAAIAY L+ +R +N+L+
Sbjct: 135 EVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRNILI 194
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 74.5 bits (175), Expect = 9e-15
Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLE-KRDGEKNVLV 195
+V AV+TVPAYFN QR+AT++A IAGL V+RI+NEPTAAAIAY L+ +R +N+L+
Sbjct: 135 EVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSLKGQRLSRRNILI 194
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 62.5 bits (145), Expect = 4e-11
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = +1
Query: 34 VVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRDGEKNVLV 195
V++ PA FN+ QR T A IA + V R+I+EPTAAA+AYGL K+ G +NV+V
Sbjct: 178 VISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKKQGVENVVV 231
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRD 174
KV+ V+ VP+YF D QR+A A AGLN +RI+NE TA A+AYG+ K+D
Sbjct: 138 KVSDCVLAVPSYFTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAYGIYKQD 189
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 52.8 bits (121), Expect = 3e-08
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Frame = +1
Query: 19 KVTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKRD--GEK 183
++ V+TVP YF A+R A + A +AGL V+++IN+ TAAA+++G+ +R GEK
Sbjct: 160 EIKDVVITVPVYFTPAERLAVERAAQMAGLTVLQLINDGTAAALSHGIFRRKEIGEK 216
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 51.6 bits (118), Expect = 7e-08
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKR 171
V V+TVP + N A+R+A A IAGLN+++++N+ +AAA+ YG+ +R
Sbjct: 145 VKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRR 194
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 51.6 bits (118), Expect = 7e-08
Identities = 22/50 (44%), Positives = 36/50 (72%)
Frame = +1
Query: 22 VTHAVVTVPAYFNDAQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLEKR 171
V V+TVP + N A+R+A A IAGLN+++++N+ +AAA+ YG+ +R
Sbjct: 161 VKDVVITVPIFLNQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGVFRR 210
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 174 IPLLKTVGDGGGGRLID---DSHYIKTSDDTGIFSGLALGVVEVSR 46
+P++++ GG + D ++HYI DD F+G+ +EV R
Sbjct: 291 LPIMQSGFRPTGGLVADTYLEAHYINNLDDNPTFNGVQSAELEVLR 336
>Z11126-9|CAA77475.2| 246|Caenorhabditis elegans Hypothetical
protein ZK637.12 protein.
Length = 246
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 180 LSIPLLKTVGDGGGGRLIDDSHYIKTSDD 94
L+ K + GG L+ D+HY+ +DD
Sbjct: 157 LTTSTFKKSNNSSGGALVLDNHYLINNDD 185
>Z11115-21|CAA77461.2| 246|Caenorhabditis elegans Hypothetical
protein ZK637.12 protein.
Length = 246
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 180 LSIPLLKTVGDGGGGRLIDDSHYIKTSDD 94
L+ K + GG L+ D+HY+ +DD
Sbjct: 157 LTTSTFKKSNNSSGGALVLDNHYLINNDD 185
>Z11115-19|CAA77457.2| 246|Caenorhabditis elegans Hypothetical
protein ZK637.15 protein.
Length = 246
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 180 LSIPLLKTVGDGGGGRLIDDSHYIKTSDD 94
L+ K + GG L+ D+HY+ +DD
Sbjct: 157 LTTSTFKKSNNSSGGALVLDNHYLINNDD 185
>L25598-1|AAA27942.1| 129|Caenorhabditis elegans Hypothetical
protein C06G4.4 protein.
Length = 129
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 168 LLKTVGDGGGGRLIDDSHYIKTS 100
LLK+ GDGG +D SH ++T+
Sbjct: 65 LLKSDGDGGKAGPVDPSHPMETT 87
>Z99281-9|CAB16515.1| 242|Caenorhabditis elegans Hypothetical
protein Y57G11C.14 protein.
Length = 242
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 180 LSIPLLKTVGDGGGGRLIDDSHYIKTSDDTGIFSGLALGV 61
L+ K + GG L+ D+HY+ +DD G S L + +
Sbjct: 153 LTTSTFKKAKNPSGGALVLDNHYLINNDD-GTVSKLPMKI 191
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 132 LIDDSHYIKTSDDTGIFSGLALGVVEVSRYSY 37
+++D H IK D G L ++ V+ +SY
Sbjct: 154 ILNDVHLIKEGDKVGASESALLNMLGVTPFSY 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.131 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,836,254
Number of Sequences: 27780
Number of extensions: 54552
Number of successful extensions: 198
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 12,740,198
effective HSP length: 44
effective length of database: 11,517,878
effective search space used: 230357560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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