Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F12
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       44   8e-07
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.6  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   8.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 43.6 bits (98), Expect = 8e-07
 Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
 Frame = +2

Query: 86  LNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCHCAKVTRHTKSPVHAFTPPTSRFS 265
           L H GA      +   Y WPN+ +  +   R+C  C   + T+ +  P      P   + 
Sbjct: 140 LGHFGATKVYNSMKREYYWPNMYRTIKKRLRSCDLC---QKTKSSNRPHQGPLTPI-LYD 195

Query: 266 H----VHVDIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDW 418
           H    V VD  GPLP    G  Y    +D F+++ ++  L    A+  AK  I D+
Sbjct: 196 HIGDLVCVDFYGPLPTGRLGASYVFVVIDVFSKFLKLYPLRKATAKIAAKRLIEDF 251


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 264 ENLLVGGVNACTGDFVWRVTF 202
           E  ++  V  CTGD  WRV +
Sbjct: 243 EMFVMPTVRNCTGDTSWRVRY 263


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 68  FDTIHGLNHPGAKTTI 115
           FD  HG+  PGAK  +
Sbjct: 19  FDLCHGVRAPGAKKKV 34



 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 294 YRFRMVSSIA 323
           YRFRM++S A
Sbjct: 344 YRFRMINSFA 353


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 68  FDTIHGLNHPGAKTTI 115
           FD  HG+  PGAK  +
Sbjct: 19  FDLCHGVRAPGAKKKV 34



 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 294 YRFRMVSSIA 323
           YRFRM++S A
Sbjct: 344 YRFRMINSFA 353


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -2

Query: 308 HSKSVVVQ*YRHVHEKICSLV 246
           H    +V+ ++++H KIC+L+
Sbjct: 203 HLNGDIVKEHQNLHNKICNLI 223


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +2

Query: 47  SEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNIRKDCRLWTRTCVDCHCAKVTRHTK 223
           +EFR +    +HG N+   K   +L T      N   D   W +   +   AK +R  +
Sbjct: 101 NEFRTKILAQVHGTNNGTNKNMRRLSTTT---QNKNDDPSYWEKRRKNNEAAKRSRDAR 156


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 208 YTPHEVASACIYTTNEQIFSCTCRYYW 288
           +T H +   CIY     +F   C YY+
Sbjct: 123 FTVHLLFLLCIYYFVVPLFFLLCIYYF 149


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 168 SLQSLRILGHTYRAV 124
           SL   ++LGH  RAV
Sbjct: 213 SLPQFKVLGHRRRAV 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,843
Number of Sequences: 336
Number of extensions: 2303
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)