Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F12
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   10.0 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   10.0 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   10.0 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   10.0 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   10.0 

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 196 MTVNTSTSPKSAVFTYIGP 140
           +T+N     K+A+  +IGP
Sbjct: 504 ITINADKPMKAAIRIFIGP 522


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 196 MTVNTSTSPKSAVFTYIGP 140
           +T+N     K+A+  +IGP
Sbjct: 504 ITINADKPMKAAIRIFIGP 522


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = +2

Query: 5   EGDTSGTSPRLYLPSEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNI 151
           EGDT+  S  L L +      +  I     PG   ++K   A    P +
Sbjct: 405 EGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQV 453


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 302 SNGFKYCLTAVDRFTRWP 355
           S G   C T+    TRWP
Sbjct: 765 SQGLLQCATSNYSTTRWP 782


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = +2

Query: 5   EGDTSGTSPRLYLPSEFRRQAFDTIHGLNHPGAKTTIKLITARYVWPNI 151
           EGDT+  S  L L +      +  I     PG   ++K   A    P +
Sbjct: 405 EGDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQV 453


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,961
Number of Sequences: 438
Number of extensions: 2450
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)