Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F11
         (231 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    20   2.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    20   2.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   5.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    19   9.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    19   9.0  

>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 104 CHHLGRHEHGSYCSVTRSAWY 42
           C+   R+ H    ++TR+ WY
Sbjct: 319 CNEEERNSHCLGGTITRTMWY 339


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 144 NERVANRKAQITKTIHEV 197
           N++VAN +  + KT+ ++
Sbjct: 532 NDKVANVRFNVAKTLQKI 549


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 156 RLSRCNTYSSGRLVSIGLPSSRAAR 82
           +LS CN+Y  G    I L   + A+
Sbjct: 245 KLSHCNSYVDGGRNEIILLCEKVAK 269


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 78  MLVPPEMM 101
           M VPPEMM
Sbjct: 357 MRVPPEMM 364


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 5/11 (45%), Positives = 6/11 (54%)
 Frame = -2

Query: 101 HHLGRHEHGSY 69
           HH G H H  +
Sbjct: 324 HHAGHHIHAQH 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,261
Number of Sequences: 336
Number of extensions: 910
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3213870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)