Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F10
         (327 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E11043 Cluster: hypothetical protein OM2255_1843...    32   2.1  
UniRef50_Q9V9U0 Cluster: CG2150-PA; n=5; Endopterygota|Rep: CG21...    32   2.8  
UniRef50_Q8T3Z4 Cluster: AT24727p; n=2; Sophophora|Rep: AT24727p...    32   2.8  
UniRef50_A0FN72 Cluster: Type IV pilus assembly PilZ; n=3; Burkh...    31   3.7  
UniRef50_Q7Z8L8 Cluster: Putative HOS3-like histone deacetylase;...    31   3.7  
UniRef50_Q9VNA4 Cluster: Uncharacterized protein CG1161; n=5; Di...    31   3.7  
UniRef50_Q18EP9 Cluster: ABC-type transport system, permease pro...    31   4.9  
UniRef50_Q9VNH6 Cluster: Probable exocyst complex component 4; n...    31   4.9  
UniRef50_A5UXV9 Cluster: Cobaltochelatase; n=1; Roseiflexus sp. ...    31   6.5  
UniRef50_Q7QT54 Cluster: GLP_13_17215_18366; n=1; Giardia lambli...    31   6.5  
UniRef50_UPI0000499B13 Cluster: hypothetical protein 79.t00020; ...    30   8.6  
UniRef50_Q89KE2 Cluster: Enoyl CoA hydratase; n=13; Proteobacter...    30   8.6  
UniRef50_Q3AFJ4 Cluster: Doubled CXXCH domain protein; n=2; Firm...    30   8.6  
UniRef50_A5K8B6 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  

>UniRef50_UPI0000E11043 Cluster: hypothetical protein OM2255_18435;
           n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
           protein OM2255_18435 - alpha proteobacterium HTCC2255
          Length = 493

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +2

Query: 20  VSILRAFVRLSKSLNTNNPAG-MADTPVESPPEATAPLTKLISEPFEAHSAYLR 178
           V+++  F  L +SL +  P   +A  P+ES   +++PL+ L+S+P  +  ++LR
Sbjct: 41  VALVAKFDALHESLASLPPVPTVAHDPIESSSTSSSPLSLLLSQPLASMQSFLR 94


>UniRef50_Q9V9U0 Cluster: CG2150-PA; n=5; Endopterygota|Rep:
           CG2150-PA - Drosophila melanogaster (Fruit fly)
          Length = 188

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +1

Query: 19  GLHLEGVRQAIQVAQYEQ 72
           G+ LEGVRQAIQVAQ+ Q
Sbjct: 137 GIDLEGVRQAIQVAQFAQ 154


>UniRef50_Q8T3Z4 Cluster: AT24727p; n=2; Sophophora|Rep: AT24727p -
           Drosophila melanogaster (Fruit fly)
          Length = 553

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 308 RLNHVEHPNHEATFNPKTNVIDLFAKVSQL 219
           RL H+ HPNH  TFN K  +I L+   + L
Sbjct: 405 RLTHMLHPNHFHTFNLKHTLIQLYGNEAGL 434


>UniRef50_A0FN72 Cluster: Type IV pilus assembly PilZ; n=3;
           Burkholderia|Rep: Type IV pilus assembly PilZ -
           Burkholderia phymatum STM815
          Length = 317

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -2

Query: 215 IDSVCMISFVSLAVSKPNELRRVR 144
           +DSVC++ F  L +SKP  +RR+R
Sbjct: 171 VDSVCLVPFHYLVLSKPGAVRRLR 194


>UniRef50_Q7Z8L8 Cluster: Putative HOS3-like histone deacetylase; n=3;
            cellular organisms|Rep: Putative HOS3-like histone
            deacetylase - Cochliobolus carbonum (Bipolaris zeicola)
          Length = 1193

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +2

Query: 35   AFVRLSKSLNTNNPAGMADTPVESPPEATAPLTKLISEPFEAHSAYLRPS 184
            +FV +++ L   +P   ADTP   PP          SE F    ++  PS
Sbjct: 1075 SFVTVTEPLTNTSPPSRADTPPPPPPTNMPQFVNYTSESFGTAPSFAAPS 1124


>UniRef50_Q9VNA4 Cluster: Uncharacterized protein CG1161; n=5;
           Diptera|Rep: Uncharacterized protein CG1161 - Drosophila
           melanogaster (Fruit fly)
          Length = 227

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +2

Query: 17  AVSILRAFVRLSKSLNTNNPAGMADTPVESPPEATAPLTKLISEPFEAHSA 169
           A +  + F  +  + N N+ A  A  P  + P A APL K +S P  A  A
Sbjct: 24  AETAAQTFPAIGTNSNNNSNAQPAPVPAPAAPAAAAPLAKQVSAPTAAPPA 74


>UniRef50_Q18EP9 Cluster: ABC-type transport system, permease
           protein I similar to LolDCE lipoprotein release factor;
           n=1; Haloquadratum walsbyi DSM 16790|Rep: ABC-type
           transport system, permease protein I similar to LolDCE
           lipoprotein release factor - Haloquadratum walsbyi
           (strain DSM 16790)
          Length = 425

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = -1

Query: 150 GSDMSLVRGAVASGGDSTGVSAMPAGLFVLSDLDSLTNALKMETAS 13
           G+D +     VA     TGV A P  L  LS+L ++T A   +TAS
Sbjct: 208 GTDQTFRITDVADSDLRTGVGAAPVALVHLSELQAITGAADGDTAS 253


>UniRef50_Q9VNH6 Cluster: Probable exocyst complex component 4; n=3;
           Sophophora|Rep: Probable exocyst complex component 4 -
           Drosophila melanogaster (Fruit fly)
          Length = 985

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +2

Query: 38  FVRLSKSLNTNNPAGMADTPVESPPEATAPLTKLISEPFEAHSAYLRP 181
           ++R   S+ TN+  G  D  +E P      LTK +SE  EA SA L P
Sbjct: 808 YLRSKSSVRTNSYVGSKDDILE-PDRQVQVLTKRLSEMDEAFSATLHP 854


>UniRef50_A5UXV9 Cluster: Cobaltochelatase; n=1; Roseiflexus sp.
           RS-1|Rep: Cobaltochelatase - Roseiflexus sp. RS-1
          Length = 1243

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -2

Query: 287 PNHEATFNPKTNVIDLFAKVSQLC--IDSVCMISFVSLAVSKPNELRRVR 144
           PN    F   T  +DLF    +LC  + SVC +  ++++ +  N+L R+R
Sbjct: 222 PNVAVLFRNTTYPVDLFPIAGRLCQRLQSVCNVVPIAISRAVGNDLERLR 271


>UniRef50_Q7QT54 Cluster: GLP_13_17215_18366; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_13_17215_18366 - Giardia lamblia
           ATCC 50803
          Length = 383

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = -2

Query: 320 CCGTRLNHVEHPNHEATFNPKTNVID-LFAKVSQLCIDSVCMISFVSLAVSKPNELRRV 147
           C    + H+  PN   +F  K    D     +   C+ ++C +S +   V KP   RRV
Sbjct: 293 CVFLSITHINSPNRLESFRTKNTCPDGPVIHMHTTCLQTICPLSDLDNIVDKPEVKRRV 351


>UniRef50_UPI0000499B13 Cluster: hypothetical protein 79.t00020;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 79.t00020 - Entamoeba histolytica HM-1:IMSS
          Length = 367

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 314 GTRLNHVEHPNHEATFNPKTNVIDLFAKVSQLCIDSVCMIS 192
           GT L  +EHPN   T+  K  V     ++  L  +++CM+S
Sbjct: 116 GTMLYTLEHPNMACTYYLKALVPSTSYELQYLVFETICMLS 156


>UniRef50_Q89KE2 Cluster: Enoyl CoA hydratase; n=13;
           Proteobacteria|Rep: Enoyl CoA hydratase - Bradyrhizobium
           japonicum
          Length = 303

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 29  LRAFVRLSKSLNTNNPAGMADTPVE--SPPEATAPL 130
           +R ++RLS S N NNP G A   V+   PP    P+
Sbjct: 9   VRCYIRLSASSNCNNPTGNASMSVQPARPPFPEPPI 44


>UniRef50_Q3AFJ4 Cluster: Doubled CXXCH domain protein; n=2;
           Firmicutes|Rep: Doubled CXXCH domain protein -
           Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
           6008)
          Length = 842

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 326 DRCCGTRLNHVEHPNHEATFNPK 258
           + C G   NH E+PNH   +NPK
Sbjct: 636 EACHGPGKNHTENPNHYNIYNPK 658


>UniRef50_A5K8B6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1748

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 323 RCCGTRLNHVEHPNHEATFNPKTNVIDLFAKVSQLCIDSVCMI 195
           R  G  +NHVE   +  T     N   LF  +SQL +  +C++
Sbjct: 806 RNAGVYINHVEQNYNPGTAEQILNCFILFTHISQLDVSDLCVL 848


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,588,995
Number of Sequences: 1657284
Number of extensions: 4225374
Number of successful extensions: 14259
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14252
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)