Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F10
         (327 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    24   0.47 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   1.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   1.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   1.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   5.7  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   7.6  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 0.47
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 305 LNHVEHPNHEATFNPKTN 252
           LNH  HP H    NP  N
Sbjct: 45  LNHAMHPYHANHVNPTAN 62


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 136 AHIRTLRSSFGLLTAKLTNDIIQTESIHN*LTLANKSITFVFG 264
           AH R L  S   L  K+ N   +T S ++   +AN ++  V+G
Sbjct: 225 AHYRVLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVA-VYG 266


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 136 AHIRTLRSSFGLLTAKLTNDIIQTESIHN*LTLANKSITFVFG 264
           AH R L  S   L  K+ N   +T S ++   +AN ++  V+G
Sbjct: 225 AHYRVLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVA-VYG 266


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 136 AHIRTLRSSFGLLTAKLTNDIIQTESIHN*LTLANKSITFVFG 264
           AH R L  S   L  K+ N   +T S ++   +AN ++  V+G
Sbjct: 225 AHYRVLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVA-VYG 266


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 314 GTRLNHVEHPNHE 276
           G R+N V+ PN+E
Sbjct: 145 GIRVNSVQEPNNE 157


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 62  NTNNPAGMADTPVESPPEA 118
           N N+PA M  TP   PP A
Sbjct: 423 NVNSPASMNQTP---PPTA 438


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 119 TAPLTKLISEP 151
           T PLT ++SEP
Sbjct: 221 TVPLTPVVSEP 231


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
          protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 13 RGGLHLEGVRQAIQV 57
          RGG+  EGV  ++QV
Sbjct: 21 RGGVISEGVASSLQV 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,995
Number of Sequences: 336
Number of extensions: 1018
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)