Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F09
(208 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 71 1e-13
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 71 1e-13
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 67 2e-12
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 66 4e-12
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 40 2e-04
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 40 3e-04
03_01_0034 + 318432-318825,318902-319851 38 8e-04
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 38 8e-04
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 37 0.002
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 37 0.002
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 37 0.002
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 37 0.003
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 37 0.003
03_02_0497 - 8891852-8892270,8892368-8892473,8892573-8892911,889... 28 0.90
11_02_0032 + 7564153-7564719,7564844-7565128,7565207-7565524,756... 27 2.7
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 2.7
03_01_0482 - 3686954-3688564 27 2.7
12_02_0044 - 12807372-12807555,12807782-12807840,12807943-128080... 26 3.6
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 26 3.6
04_01_0211 + 2649405-2649950,2650100-2650285,2650367-2650583,265... 26 4.8
03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706... 25 6.3
02_04_0288 + 21607289-21608251 25 6.3
06_03_0202 - 17860937-17861542 25 8.4
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 71.3 bits (167), Expect = 1e-13
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRECIS+HIGQAG+Q+GNACWELYCLEHGI
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGI 30
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 71.3 bits (167), Expect = 1e-13
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRECIS+HIGQAG+Q+GNACWELYCLEHGI
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGI 30
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 67.3 bits (157), Expect = 2e-12
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+HIGQAG+Q+GNACWELYCLEHGI
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGI 30
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 66.1 bits (154), Expect = 4e-12
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+HIGQAG+Q+GN+CWELYCLEHGI
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGI 30
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 115 KMRECISVHIGQAGVQIGNACWELYCLEHGI 207
KMRE + + GQ G QIG+ WE+ C EHGI
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGI 210
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 39.9 bits (89), Expect = 3e-04
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 121 RECISVHIGQAGVQIGNACWELYCLEHGI 207
RE I++ +GQ G QIG W+ CLEHGI
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGI 31
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 38.3 bits (85), Expect = 8e-04
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG WE+ C EHGI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGI 30
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 38.3 bits (85), Expect = 8e-04
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG+ WE+ C EHGI
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGI 30
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG WE+ C EHGI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGI 30
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG WE+ C EHGI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGI 30
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG WE+ C EHGI
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGI 30
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG WE+ C EHG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGV 30
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG WE+ C EHG+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGV 30
>03_02_0497 -
8891852-8892270,8892368-8892473,8892573-8892911,
8893065-8893415
Length = 404
Score = 28.3 bits (60), Expect = 0.90
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 199 ARGSTAPSMRCRSELRLARC 140
+RGS AP+ CR E++L +C
Sbjct: 168 SRGSVAPAPTCRCEMQLPKC 187
>11_02_0032 +
7564153-7564719,7564844-7565128,7565207-7565524,
7565612-7565839,7566662-7566762,7566852-7566933,
7567230-7567364,7567460-7567516,7568030-7568167
Length = 636
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 73 GARVASRVRNATHHRAELMQHRG 5
G R++ RV+N THH L+ G
Sbjct: 588 GVRMSCRVKNRTHHSGSLVTPEG 610
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 2.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 169 NACWELYCLEHGI 207
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>03_01_0482 - 3686954-3688564
Length = 536
Score = 26.6 bits (56), Expect = 2.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 4 SPGAALIRHDGALHCEPATPHALHITTAFCKLSSTYTKMRECISVHIGQAG 156
+PGA L D AL +PA P AL A + Y++ EC + +G
Sbjct: 70 APGA-LADCDAALAADPAHPGALLSKGAVLRGLGRYSRAAECFRAALAVSG 119
>12_02_0044 -
12807372-12807555,12807782-12807840,12807943-12808072,
12808160-12808224,12808318-12808506,12808574-12809119,
12809258-12809497,12809598-12810032
Length = 615
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 58 TP-HALHITTAFCKLSSTYT 114
TP H LH+ T C LSS YT
Sbjct: 354 TPCHTLHLETYACALSSVYT 373
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 50 NPRRHTRSILRQPFVNYLQHIPK 118
+PRR TRS+L P L H PK
Sbjct: 87 SPRRITRSMLLNPSAPLLHHHPK 109
>04_01_0211 +
2649405-2649950,2650100-2650285,2650367-2650583,
2650705-2650781,2650884-2650892
Length = 344
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 134 EMHSLILVYVEDNLQKAVVIW 72
EM+ L L V D +Q+ ++IW
Sbjct: 184 EMYDLFLRLVRDEIQQQIIIW 204
>03_05_0823 -
27970038-27970258,27970279-27970544,27970608-27970657,
27971272-27971538,27971633-27972001,27972373-27973278
Length = 692
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = +1
Query: 46 CEPATPHALHITTAFCKLSSTYTKMRECISVHIGQAGVQIGNACWELYCLEHGI 207
C P A + CKL ++ IS HI G C + ++ GI
Sbjct: 590 CNPICAEAAIYSLPHCKLGDLTENVKNPISGHIWLDSEGTGRGCTVTFVIQLGI 643
>02_04_0288 + 21607289-21608251
Length = 320
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 129 HLSTHRASRSSDRQRMLGAVLPRAWY 206
HL+ H + R+R+ GAVL W+
Sbjct: 168 HLAMHHHHDAPPRRRLRGAVLIHPWF 193
>06_03_0202 - 17860937-17861542
Length = 201
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 49 EPATPHALHITTAFCKLSSTYTKMRECISVHI 144
+ A PH L +T+ L S + R C++ ++
Sbjct: 25 QDAPPHPLQVTSPDSSLPSPSPRQRRCVAAYM 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,824,117
Number of Sequences: 37544
Number of extensions: 120438
Number of successful extensions: 369
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 14,793,348
effective HSP length: 48
effective length of database: 12,991,236
effective search space used: 259824720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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