Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F09
(208 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 68 8e-13
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 68 8e-13
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 68 8e-13
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 68 1e-12
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 68 1e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 68 1e-12
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 68 1e-12
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 68 1e-12
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 68 1e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 68 1e-12
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 68 1e-12
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 66 2e-12
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 66 3e-12
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 65 6e-12
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 65 7e-12
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 36 0.003
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 36 0.003
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 36 0.004
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 36 0.004
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 36 0.005
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 36 0.005
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 35 0.007
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 35 0.009
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 31 0.11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 31 0.11
Z47356-6|CAA87419.1| 554|Caenorhabditis elegans Hypothetical pr... 27 2.4
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 26 4.2
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 25 5.6
L16560-4|AAA27997.1| 111|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 25 5.6
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 25 5.6
U39653-4|AAL56624.1| 649|Caenorhabditis elegans Prion-like-(q/n... 25 9.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 68.1 bits (159), Expect = 8e-13
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+HIGQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGI 30
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 68.1 bits (159), Expect = 8e-13
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+HIGQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGI 30
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 68.1 bits (159), Expect = 8e-13
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+HIGQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGI 30
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+H+GQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+H+GQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+H+GQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE +S+HIGQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGI 30
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+H+GQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+H+GQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+H+GQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 67.7 bits (158), Expect = 1e-12
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE IS+H+GQAGVQIGNACWELYCLEHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 66.5 bits (155), Expect = 2e-12
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 121 RECISVHIGQAGVQIGNACWELYCLEHGI 207
REC+S+HIGQAG QIGNACWELYC+EHG+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGL 34
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 66.1 bits (154), Expect = 3e-12
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 121 RECISVHIGQAGVQIGNACWELYCLEHGI 207
RE IS+HIGQAGVQIGNACWELYCLEHGI
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGI 29
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 65.3 bits (152), Expect = 6e-12
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +1
Query: 109 YTKMRECISVHIGQAGVQIGNACWELYCLEHGI 207
Y RE IS+H+GQAGVQIGNACWEL+CLEHGI
Sbjct: 4 YKGSREVISIHVGQAGVQIGNACWELFCLEHGI 36
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 64.9 bits (151), Expect = 7e-12
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +1
Query: 115 KMRECISVHIGQAGVQIGNACWELYCLEHGI 207
+ RE IS+H+GQAGVQ+GNACWELYCLEHGI
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGI 35
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + V GQ G QIG+ WE+ EHGI
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGI 30
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 36.3 bits (80), Expect = 0.003
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + V GQ G QIG+ WE+ EHGI
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGI 30
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG+ WE+ EHGI
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGI 30
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG+ WE+ EHGI
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGI 30
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 35.5 bits (78), Expect = 0.005
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
M+E I+V +GQ G QIG WE EHG+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGL 30
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 35.5 bits (78), Expect = 0.005
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
M+E I+V +GQ G QIG WE EHG+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGL 30
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.007
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + V GQ G QIG WE+ EHGI
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGI 30
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 34.7 bits (76), Expect = 0.009
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 118 MRECISVHIGQAGVQIGNACWELYCLEHGI 207
MRE + + GQ G QIG WE+ EHGI
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 30
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 130 ISVHIGQAGVQIGNACWELYCLEHGI 207
++VH+GQ G Q+ A W+ EHGI
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGI 33
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 130 ISVHIGQAGVQIGNACWELYCLEHGI 207
++VH+GQ G Q+ A W+ EHGI
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGI 33
>Z47356-6|CAA87419.1| 554|Caenorhabditis elegans Hypothetical
protein T15H9.6 protein.
Length = 554
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -3
Query: 176 HALPI*TPACPMCTEMHSL---ILVYVEDNLQKAVVI 75
H +PI TPA P H++ + ++D ++KA++I
Sbjct: 309 HLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALII 345
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resistance
protein familyprotein 6 protein.
Length = 1396
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 91 CKLSSTYTKMRECISVHIGQAGVQIGNACWELYCL 195
C+L + TK + ++V +GQ GV + +L+CL
Sbjct: 1247 CELKRSITKEKG-LNVELGQRGVSLSVGQRQLFCL 1280
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 200 CSRQYSSQHALPI*TPACPMCT 135
C R YSS H+ TPA P C+
Sbjct: 94 CMRPYSSPHSPVRPTPAAPDCS 115
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 200 CSRQYSSQHALPI*TPACPMCT 135
C R YSS H+ TPA P C+
Sbjct: 94 CMRPYSSPHSPVRPTPAAPDCS 115
>L16560-4|AAA27997.1| 111|Caenorhabditis elegans Hypothetical
protein D2007.1 protein.
Length = 111
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 89 KAVVIWSACGVAGSQCNAPSC 27
KA S CGV SQC+A C
Sbjct: 47 KASASTSRCGVQASQCSAYEC 67
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 200 CSRQYSSQHALPI*TPACPMCT 135
C R YSS H+ TPA P C+
Sbjct: 94 CMRPYSSPHSPVRPTPAAPDCS 115
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 200 CSRQYSSQHALPI*TPACPMCT 135
C R YSS H+ TPA P C+
Sbjct: 94 CMRPYSSPHSPVRPTPAAPDCS 115
>U39653-4|AAL56624.1| 649|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform b protein.
Length = 649
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +1
Query: 22 IRHDGALHCEPATPHALHITTAFCKLSSTYTKMRECI 132
+ D A + E +TP L+ A C T EC+
Sbjct: 427 LEKDSAPNPEDSTPSVLNREDASCTTQKTRNSFEECV 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,511,058
Number of Sequences: 27780
Number of extensions: 98328
Number of successful extensions: 281
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 12,740,198
effective HSP length: 48
effective length of database: 11,406,758
effective search space used: 228135160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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