Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F08
         (363 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    28   0.12 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   0.87 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   0.87 
EF426170-1|ABO26413.1|  155|Anopheles gambiae unknown protein.         24   2.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   3.5  
Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           22   6.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    22   6.2  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 236 ARQPLPPDDERQKTRVL 286
           AR+P PP  ERQ TRVL
Sbjct: 58  ARKPFPPITERQTTRVL 74


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 174 CKRVADMMFASARGRR*VRAHTRAGADTRRPRT 76
           C R +D   +  R RR  +   RA ++ +RPRT
Sbjct: 471 CTRYSDRPSSGPRYRRTKQPKKRADSEEKRPRT 503


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 174 CKRVADMMFASARGRR*VRAHTRAGADTRRPRT 76
           C R +D   +  R RR  +   RA ++ +RPRT
Sbjct: 471 CTRYSDRPSSGPRYRRTKQPKKRADSEEKRPRT 503


>EF426170-1|ABO26413.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 312 ATGTVCGVNGVTYISEC 362
           A GTV G  G  Y+ EC
Sbjct: 82  AKGTVGGATGYAYVREC 98


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = +3

Query: 249 CH---LMMNGRKLAYWGECLSGCSATGTVCGVNGVTY-ISEC 362
           CH   L   G KL        G  ATG V G+ GVT+  S C
Sbjct: 5   CHFHELQEEGWKLNRTNYYQEGWLATGNVRGIVGVTFTTSHC 46


>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 123 VRAHTRAGADTRRPRTPHALRNLSPRPSHPRAEFQQPGG 7
           V A  +A A  +R R P+ L    PRP H  +  +  GG
Sbjct: 15  VVACAQAHASHQR-RVPYPLPRFLPRPHHTVSNHRIVGG 52


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 174 CKRVADMMFASARGRR*VRAHTRA 103
           CK V  +++   RG R VRA ++A
Sbjct: 44  CKSVHFVIYKDTRGGRRVRAKSKA 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,681
Number of Sequences: 2352
Number of extensions: 6892
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)