Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F08
(363 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 38 0.002
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 37 0.004
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 33 0.061
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 31 0.25
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 31 0.33
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 30 0.43
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 29 0.75
U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical pr... 29 0.75
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 29 0.75
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 29 1.3
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 28 1.7
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 28 2.3
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 28 2.3
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 2.3
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 2.3
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 27 3.0
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 27 3.0
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 27 5.3
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 27 5.3
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 27 5.3
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 26 7.0
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 26 7.0
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 26 9.3
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 26 9.3
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 171 CINNTGCNSQSASPVCDTDGLTHANPCHLMMN 266
C C+ SPVCDT+G+THAN C + N
Sbjct: 918 CCRIENCDISVFSPVCDTEGVTHANMCLMDQN 949
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 180 NTGCNSQSASPVCDTDGLTHANPCH 254
+T C S SPVCD+ G TH N CH
Sbjct: 815 DTNCPSDF-SPVCDSKGSTHQNICH 838
Score = 32.3 bits (70), Expect = 0.11
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 13/68 (19%)
Frame = +3
Query: 198 QSASPVCDTDGLTHANPC----------HLMMNGRKLAYWGEC--LSGCSATG-TVCGVN 338
+S+ VCD++G TH N C + + + GEC L+ C TG VC
Sbjct: 1025 ESSGAVCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQPVCDSR 1084
Query: 339 GVTYISEC 362
G T+ S C
Sbjct: 1085 GRTHDSLC 1092
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Frame = +3
Query: 210 PVCDTDGLTHANPCHLMMNGRK-----LAYWGECL--SGCSATGT-VCGVNGVTYISEC 362
PVC TD +T+ N C L R Y G C C GT +C G T+I++C
Sbjct: 27 PVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCDKKECEKVGTPICDNFGETHINDC 85
Score = 29.5 bits (63), Expect = 0.75
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 171 CINNTGCNSQSASPVCDTDGLTHANPCH 254
C + C + +P+CD G TH N CH
Sbjct: 60 CCDKKECE-KVGTPICDNFGETHINDCH 86
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 156 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMM 263
C C +N C + PVCDT+G + N C M
Sbjct: 110 CSSKDCNHN--CTNTEFDPVCDTNGSVYRNLCVFQM 143
Score = 28.7 bits (61), Expect = 1.3
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Frame = +3
Query: 180 NTGCNSQSASPVCDTDGLTHANPCHL----------MMNGRKLA--YWGEC--LSGC--S 311
N C + SPVC ++G N C L + G KL Y GEC + C S
Sbjct: 869 NNACPKEY-SPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGECCRIENCDIS 927
Query: 312 ATGTVCGVNGVTYISEC 362
VC GVT+ + C
Sbjct: 928 VFSPVCDTEGVTHANMC 944
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +3
Query: 195 SQSASPVCDTDGLTHANPCHLMM---NGRKL 278
S+ PVCD TH N CH N RKL
Sbjct: 376 SRDVKPVCDEANNTHQNLCHFQQYNCNMRKL 406
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Frame = +3
Query: 201 SASPVCDTDGLTHANPCHLMM-------NGRKLAYWGECL-SGC-SATGTVCGVNGVTYI 353
S P+C T+G+T N C L + ++AY G C + C S VC G T+
Sbjct: 775 SYDPLCGTNGVTFTNACSLQKEICESANSTIEVAYTGMCCDTNCPSDFSPVCDSKGSTHQ 834
Query: 354 SEC 362
+ C
Sbjct: 835 NIC 837
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 198 QSASPVCDTDGLTHANPCH 254
++ PVCD+ G TH + CH
Sbjct: 1075 KTGQPVCDSRGRTHDSLCH 1093
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 189 CNSQSASPVCDTDGLTHANPCHLMMNGRKL 278
C+++ PVC G T C L + KL
Sbjct: 693 CDTEKPDPVCTDSGATFLTECELNIENCKL 722
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 198 QSASPVCDTDGLTHANPC 251
+S PVCDT TH N C
Sbjct: 259 KSWDPVCDTRNRTHKNVC 276
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 37.1 bits (82), Expect = 0.004
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 132 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHL 257
C +C AC T CN S P+C +DG+ + N CHL
Sbjct: 668 CACYFGATCHNWACTCPT-CNLSSNYPICGSDGIVYNNQCHL 708
Score = 30.3 bits (65), Expect = 0.43
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 156 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMM 263
CPQ +N+ G + VC +DG T++N C L M
Sbjct: 863 CPQSCNMNHLGIVANMT--VCGSDGTTYSNLCELKM 896
Score = 29.1 bits (62), Expect = 1.00
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +3
Query: 147 QTSCP--QHACINNTGCNSQ--SASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSGCSA 314
Q+SC HAC + T + C + C L ++ R +C C+
Sbjct: 269 QSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC---KCSEQCTM 325
Query: 315 TGT-VCGVNGVTYISEC 362
VCG +G TY++EC
Sbjct: 326 NSAHVCGTDGKTYLNEC 342
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +3
Query: 171 CINNTGC----NSQSASPVCDTDGLTHANPCHL 257
C+ T C +S +SPVC + G+ + + CHL
Sbjct: 242 CVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 274
Score = 27.5 bits (58), Expect = 3.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 198 QSASPVCDTDGLTHANPCHL 257
+ VC TDG+T+++ CH+
Sbjct: 546 EEGKEVCGTDGVTYSSECHM 565
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 324 VCGVNGVTYISEC 362
VCG +GVTY SEC
Sbjct: 551 VCGTDGVTYSSEC 563
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +3
Query: 171 CINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRK----LAYWGECLSGCSATGTVC 329
C + C SA VC TDG T+ N C L + K + W C G+ C
Sbjct: 317 CKCSEQCTMNSAH-VCGTDGKTYLNECFLKLAACKEQKDILVWKR--GNCDEAGSPC 370
Score = 23.4 bits (48), Expect(2) = 2.0
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +3
Query: 210 PVCDTDGLTHANPCHLMMNG------RKLAYWGECLSGCSATGTVC 329
PVC T+G T N C + K+ + G C G AT C
Sbjct: 403 PVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSC 448
Score = 23.0 bits (47), Expect(2) = 2.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 324 VCGVNGVTYISEC 362
VCG +G TY +EC
Sbjct: 475 VCGSDGKTYSNEC 487
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 33.1 bits (72), Expect = 0.061
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 132 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTH-ANPCHLMMNGRKLAYWGE 293
C S+ +S Q C+N+ C S + P CD H C + N +L + G+
Sbjct: 223 CKSKSMSSREQFVCLNDGECYSSNDGPHCDCQFSDHDGRNCEIEKNDGELTFGGD 277
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.1 bits (67), Expect = 0.25
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 171 CINNTGCNSQSASPVCDTDGLTHANPCH 254
C + C + PVC DG + +PCH
Sbjct: 524 CNSQCSCENAHLYPVCSADGTAYFSPCH 551
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 30.7 bits (66), Expect = 0.33
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 171 CINNTGCNSQSASPVCDTDGLTHANPCH 254
C + C + PVCD G + +PCH
Sbjct: 532 CNSQCSCENARLYPVCDQTGFAYFSPCH 559
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 30.3 bits (65), Expect = 0.43
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 156 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMM 263
CPQ +N+ G + VC +DG T++N C L M
Sbjct: 802 CPQSCNMNHLGIVANMT--VCGSDGTTYSNLCELKM 835
Score = 29.1 bits (62), Expect = 1.00
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Frame = +3
Query: 147 QTSCP--QHACINNTGCNSQ--SASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSGCSA 314
Q+SC HAC + T + C + C L ++ R +C C+
Sbjct: 277 QSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC---KCSEQCTM 333
Query: 315 TGT-VCGVNGVTYISEC 362
VCG +G TY++EC
Sbjct: 334 NSAHVCGTDGKTYLNEC 350
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = +3
Query: 171 CINNTGC----NSQSASPVCDTDGLTHANPCHL 257
C+ T C +S +SPVC + G+ + + CHL
Sbjct: 250 CVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 282
Score = 27.5 bits (58), Expect = 3.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 198 QSASPVCDTDGLTHANPCHL 257
+ VC TDG+T+++ CH+
Sbjct: 554 EEGKEVCGTDGVTYSSECHM 573
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 324 VCGVNGVTYISEC 362
VCG +GVTY SEC
Sbjct: 559 VCGTDGVTYSSEC 571
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +3
Query: 171 CINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRK----LAYWGECLSGCSATGTVC 329
C + C SA VC TDG T+ N C L + K + W C G+ C
Sbjct: 325 CKCSEQCTMNSAH-VCGTDGKTYLNECFLKLAACKEQKDILVWKR--GNCDEAGSPC 378
Score = 23.4 bits (48), Expect(2) = 2.0
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +3
Query: 210 PVCDTDGLTHANPCHLMMNG------RKLAYWGECLSGCSATGTVC 329
PVC T+G T N C + K+ + G C G AT C
Sbjct: 411 PVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSC 456
Score = 23.0 bits (47), Expect(2) = 2.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 324 VCGVNGVTYISEC 362
VCG +G TY +EC
Sbjct: 483 VCGSDGKTYSNEC 495
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 29.5 bits (63), Expect = 0.75
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = +3
Query: 126 NVCLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSG 305
N C ++ Q++CP C+ CNSQ S ++ N +++ ++ +C S
Sbjct: 256 NSCSNQCQSACPTPICVQQ--CNSQCQSQCSNSCSGNSCNQQQVIVLQQQDNCQNQCQSS 313
Query: 306 CSAT 317
C T
Sbjct: 314 CMNT 317
>U40953-6|AAB52651.1| 809|Caenorhabditis elegans Hypothetical
protein F53B1.8 protein.
Length = 809
Score = 29.5 bits (63), Expect = 0.75
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 201 SASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSGCSAT 317
S + C D + C + +GR+ Y+ C +GCS T
Sbjct: 599 SCNKQCTCDPSEYRPVCAELDDGRQFTYYSPCYAGCSET 637
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 29.5 bits (63), Expect = 0.75
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 171 CINNTGCNSQSASPVCDTDGLTHANPCH 254
C ++ C PVCD G + +PCH
Sbjct: 512 CRDDCMCEQTPLYPVCDVSGSAYYSPCH 539
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 177 NNTG-CNSQSASPVCDTDGLTHANP-CHLMMNGRKLAYWGECLSGCSATGTVCGVNGVTY 350
N+TG C +Q VC T + + N C + +G L G C++G TG CG + Y
Sbjct: 119 NSTGPCVNQ----VCPTGFMCNTNNYCCPLGSGGVL---GSCVNGVCPTGYTCGAGNLCY 171
Query: 351 IS 356
+S
Sbjct: 172 LS 173
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 28.3 bits (60), Expect = 1.7
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Frame = +3
Query: 162 QHACINNTGCNSQSASPVCDTDGLTHANPC----------HLMMNGRKLAYWGECLSG-C 308
Q C C ++ +PVCD G THAN C + + ++ Y G C C
Sbjct: 116 QEKCSCTAPCPTEW-NPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCEDMC 174
Query: 309 SA---TGTVCGVNGVTYISEC 362
SA + TVC G T+ C
Sbjct: 175 SAGQTSLTVCDSEGNTHTDIC 195
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 27.9 bits (59), Expect = 2.3
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Frame = +3
Query: 126 NVCLSRLQTSCPQHACINNTGCNSQSASPVCDTDG-LTHANPCH---LMMNGRKL--AYW 287
NV S L C N C+S +PVC D LT +PCH M G K + W
Sbjct: 430 NVPSSDLPRYGALETCSENCHCDS-FFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNW 488
Query: 288 GECLSGCS 311
C GCS
Sbjct: 489 TNC--GCS 494
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 156 CPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMN-GRKLAYWGECLSGCSATGTVC 329
C +A N C S S C T+ + +N C+ ++ G + +CLS ++C
Sbjct: 364 CLNNAVCTNNICVSTFCSVSCSTNQVCISNQCYNYVSIGSQCVGSQQCLSNSQCISSIC 422
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 120 RAHTRAGADTRRPRTPHALRNLSPRPSHPRAEFQQP 13
R H + + ++ PR P R P P+ PR QP
Sbjct: 92 RHHHQTSSPSQYPRPPSRDRESQPPPTQPRHHHHQP 127
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 120 RAHTRAGADTRRPRTPHALRNLSPRPSHPRAEFQQP 13
R H + + ++ PR P R P P+ PR QP
Sbjct: 92 RHHHQTSSPSQYPRPPSRDRESQPPPTQPRHHHHQP 127
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 132 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPC 251
C+S ++ +++CI C Q C+ D L +NPC
Sbjct: 136 CVSSNSSATTEYSCI----CTDQQFGTHCEYDNLCASNPC 171
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +3
Query: 132 CLSRLQTSCPQHACINNTGCNSQSASPVCDTDGLTHANPC 251
C + Q++C N C Q A P CD + NPC
Sbjct: 241 CQQQAQSTCDCAPVQQNPCC--QQAQPACDCAPVVQQNPC 278
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +3
Query: 126 NVCLSRLQTSCPQHACINNTGCNSQSASPVCD 221
N C + Q +C + C Q A P CD
Sbjct: 257 NPCCQQAQPACDCAPVVQQNPCACQQAQPSCD 288
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 95 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 146
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 95 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 146
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 95 QTNCEKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 146
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -1
Query: 138 RGRR*VRAHTRAGADTRRPRTPHALR--NLSPRPS--HPRAEFQQPGGST 1
R R R H+ A T +P TP A L P PS P+ Q+P +T
Sbjct: 343 RSRGRPRIHSSASKKTEKPETPRAESPDPLPPPPSKKRPKEPSQEPSTNT 392
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 162 QHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLSGC 308
Q CI++ C+S+ A+ CD N + + L + G+C++ C
Sbjct: 1208 QKGCISDEQCSSREANSTCD-------NGYCICPTDKPLVHGGKCIATC 1249
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 26.2 bits (55), Expect = 7.0
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 147 QTSCPQHACINNTGCNSQSASPVCDTDGLTHANPCHLMMNGRKLAYWGECLS 302
QT+C +H C NN+ C S + L +NG K A E L+
Sbjct: 81 QTNCXKHLCQNNSTCVSIKSLRTIVNTVLLRQIRVQRKVNGSKAALTNEELA 132
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 278 EFSAVHHQVAGVGVREPVRITHRGRGLRVA 189
E S V HQV +G+RE +R+ G R A
Sbjct: 597 EESRVKHQVEYLGLRENIRVRRAGFAYRRA 626
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 278 EFSAVHHQVAGVGVREPVRITHRGRGLRVA 189
E S V HQV +G+RE +R+ G R A
Sbjct: 534 EESRVKHQVEYLGLRENIRVRRAGFAYRRA 563
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,207,979
Number of Sequences: 27780
Number of extensions: 157955
Number of successful extensions: 597
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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