SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F07
         (267 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.19 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   0.25 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   0.25 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   0.43 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   1.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   2.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   2.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   2.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   3.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   3.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   3.0  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    19   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.19
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +1

Query: 88  HLLNFIENIIYPCITFFFY--II**LHTIKVYSVIYMPIT*VIICMTS*VFDL 240
           HLL +   II  CI +F+Y  I+  +H + +  + Y     ++ C    +F +
Sbjct: 225 HLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTM 277


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.2 bits (50), Expect = 0.25
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 108 KYYLSMYYVFLLHYLITA 161
           K+Y+  +YV +L +L+TA
Sbjct: 97  KFYVQKFYVVILAFLLTA 114


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 0.25
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 108 KYYLSMYYVFLLHYLITA 161
           K+Y+  +YV +L +L+TA
Sbjct: 23  KFYVQKFYVVILAFLLTA 40


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 0.43
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 85  KHLLNFIENIIYPCITFFF 141
           KH L  ++NI+ P I F++
Sbjct: 117 KHNLFLLDNIVKPIIAFYY 135


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +3

Query: 87  TSFKFH*KYYLSMYYVFLLHYLITAYNQSLQCYLYANNMSDNLYDK 224
           + F+ +  ++ S++ V +L  ++  Y Q     L      + LY K
Sbjct: 44  SDFENYVTFFCSLFIVVILKLILAKYRQQDVTLLQITKAKNLLYSK 89


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 108 KYYLSMYYVFLLHYLITAYNQSL 176
           KYY  +Y+  ++ YL +A N  L
Sbjct: 328 KYYNILYFCRIMVYLNSAINPIL 350


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 129 YVFLLHYLITAYNQSLQ-CYLYANNMS 206
           Y F L Y+ T Y++ L   + Y + M+
Sbjct: 87  YFFYLSYIYTTYSRKLSGIFKYIDQMA 113


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +3

Query: 129 YVFLLHYLITAYNQSLQ-CYLYANNMS 206
           Y F L Y+ T Y++ L   + Y + M+
Sbjct: 43  YFFYLSYIYTTYSRKLSGIFKYIDQMA 69


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 79  KKKHLLNFIENIIYPCITFF 138
           K K    F+  ++Y  +TFF
Sbjct: 39  KAKSFCTFVAALVYCSVTFF 58


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 76  IKKKHLLNFIENIIYP 123
           ++KKH+L  +  + YP
Sbjct: 88  VQKKHILKNVFGVAYP 103


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 76  IKKKHLLNFIENIIYP 123
           ++KKH+L  +  + YP
Sbjct: 88  VQKKHILKNVFGVAYP 103


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 111 YYLSMYYVFLLHY 149
           + L +YY++  HY
Sbjct: 9   FLLLLYYIYSKHY 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,169
Number of Sequences: 336
Number of extensions: 1126
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4378513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)

- SilkBase 1999-2023 -