Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_F07
(267 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64839-1|AAB04844.2| 399|Caenorhabditis elegans Acyltransferase... 29 0.60
AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical ... 27 2.4
Z74043-1|CAA98547.1| 368|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 26 4.2
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 26 4.2
U43375-4|AAA83621.1| 205|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL117204-27|CAB55133.2| 241|Caenorhabditis elegans Hypothetical... 26 4.2
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 26 4.2
Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical p... 25 7.4
Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL132948-6|CAC51070.1| 395|Caenorhabditis elegans Hypothetical ... 25 7.4
AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine n... 25 7.4
AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho ... 25 7.4
AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-... 25 7.4
AF078783-4|AAC26919.2| 87|Caenorhabditis elegans Hypothetical ... 25 9.7
AF016676-5|AAG24100.1| 473|Caenorhabditis elegans Cytochrome p4... 25 9.7
>U64839-1|AAB04844.2| 399|Caenorhabditis elegans
Acyltransferase-like protein 9 protein.
Length = 399
Score = 28.7 bits (61), Expect = 0.60
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 123 MYYVFLLHYLITAYNQSLQCYLYANNMSDNLYD-KLGF*SAV*Q-EMDMF 266
++Y ++LH +T + +Q ANN+ +YD +GF A+ Q E+D+F
Sbjct: 205 VHYQYVLHPRVTGFVHIVQAMRRANNIK-YIYDVSIGFGDAIVQSELDIF 253
>AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical
protein Y17G7B.3 protein.
Length = 260
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -1
Query: 243 LQIKNLT--CHTNYHSCYWHINN 181
LQIK L+ CHT+ H CY HI N
Sbjct: 102 LQIKCLSTPCHTSGHICY-HITN 123
>Z74043-1|CAA98547.1| 368|Caenorhabditis elegans Hypothetical
protein T19B10.2 protein.
Length = 368
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 165 NQSLQCYLYANNMSDNLYDKLG 230
NQ +C L AN++S N +DK G
Sbjct: 71 NQKDRCVLAANDLSHNAWDKNG 92
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 99 FH*KYYLSMYYVFLLHYLITAYNQSLQCY 185
F+ K +L +Y FLL + +T ++ CY
Sbjct: 273 FNEKIFLFLYIWFLLVFFVTLFDSIFLCY 301
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 99 FH*KYYLSMYYVFLLHYLITAYNQSLQCY 185
F+ K +L +Y FLL + +T ++ CY
Sbjct: 273 FNEKIFLFLYIWFLLVFFVTLFDSIFLCY 301
>U43375-4|AAA83621.1| 205|Caenorhabditis elegans Hypothetical
protein K09C4.6 protein.
Length = 205
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 186 NNTVNFDCMQLLNNVKEKRNTWINNI 109
N T+NF C LL NV K+ T ++++
Sbjct: 101 NATINFICTPLLVNVPTKQATSLSSV 126
>AL117204-27|CAB55133.2| 241|Caenorhabditis elegans Hypothetical
protein Y116A8C.43 protein.
Length = 241
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3
Query: 88 VFF*FQLFLYSHHKGA 41
VFF F LF YSH GA
Sbjct: 8 VFFLFSLFFYSHLNGA 23
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 104 MKFKRCFFLISTISLFAS*RSIMTVSVS-ENHK 9
M+FK+C +S+FA +M SVS +HK
Sbjct: 1 MRFKQCIIFSIIVSIFAEKERMMDGSVSPSDHK 33
>Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical
protein C33D9.1b protein.
Length = 826
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = -1
Query: 165 CMQLLNNVKEKRNTWINNIFNEI 97
C++L ++++N W+++IF+ I
Sbjct: 590 CVELFTPTQKEKNDWVDSIFSII 612
>Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical
protein C33D9.1a protein.
Length = 844
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = -1
Query: 165 CMQLLNNVKEKRNTWINNIFNEI 97
C++L ++++N W+++IF+ I
Sbjct: 590 CVELFTPTQKEKNDWVDSIFSII 612
>AL132948-6|CAC51070.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.7 protein.
Length = 395
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 267 RTYPFLVILQIKNLTCHTNYHSC 199
+ +P+LV +IKN+T ++ SC
Sbjct: 170 KAFPYLVSQKIKNVTSSLSFLSC 192
>AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine
nucleotide exchangefactor FGD-1 protein.
Length = 826
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = -1
Query: 165 CMQLLNNVKEKRNTWINNIFNEI 97
C++L ++++N W+++IF+ I
Sbjct: 590 CVELFTPTQKEKNDWVDSIFSII 612
>AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho
guanine nucleotideexchange factor FGD-1 protein.
Length = 844
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = -1
Query: 165 CMQLLNNVKEKRNTWINNIFNEI 97
C++L ++++N W+++IF+ I
Sbjct: 590 CVELFTPTQKEKNDWVDSIFSII 612
>AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-GTP
exchange factor protein.
Length = 826
Score = 25.0 bits (52), Expect = 7.4
Identities = 7/23 (30%), Positives = 17/23 (73%)
Frame = -1
Query: 165 CMQLLNNVKEKRNTWINNIFNEI 97
C++L ++++N W+++IF+ I
Sbjct: 590 CVELFTPTQKEKNDWVDSIFSII 612
>AF078783-4|AAC26919.2| 87|Caenorhabditis elegans Hypothetical
protein H10E21.1 protein.
Length = 87
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 162 MQLLNNVKEKRNTWINNI 109
M LLN V ++R TW +I
Sbjct: 36 MHLLNRVSKRRTTWTQSI 53
>AF016676-5|AAG24100.1| 473|Caenorhabditis elegans Cytochrome p450
family protein 33C7 protein.
Length = 473
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 1 HEAL*FSLTETVIMLLYDANKEIVEIKKKHLLNFIENI 114
H A+ + +T+ +D + + K KHL+ F EN+
Sbjct: 169 HNAIANVINQTIFGYRFDESNQEEYKKLKHLIEFQENV 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,335,900
Number of Sequences: 27780
Number of extensions: 86110
Number of successful extensions: 254
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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