Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F06
         (140 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   2.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    20   2.0  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   4.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    19   4.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    19   4.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    18   8.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    18   8.0  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 71  AFDTQTDLAFFARAVLTDK 15
           A DT+ D+AF +  VL  K
Sbjct: 460 AVDTRKDMAFVSDLVLRPK 478


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 71  AFDTQTDLAFFARAVLTDK 15
           A DT+ D+AF +  VL  K
Sbjct: 460 AVDTRKDMAFVSDLVLRPK 478


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 33  TREKGQIGLSVESQRYVRWE 92
           TRE G IG +   + Y  W+
Sbjct: 292 TREMGVIGYNEVCELYSDWD 311


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +2

Query: 59  ECRKPAVRPLGNTRATLVFGD 121
           + + P  +P G  R+  +F D
Sbjct: 548 QSQNPPTKPYGTCRSEGIFSD 568



 Score = 18.2 bits (35), Expect = 8.0
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 47   PNRSECRKP 73
            P+R +C KP
Sbjct: 998  PSREDCTKP 1006


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 120 SPNTSVARVFPNGRT 76
           S + S +  FP GRT
Sbjct: 8   STSPSASEAFPGGRT 22


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 57  LSVESQRYVRWEILVLRLYSATIV 128
           L++    +  W I+++ LYS+ +V
Sbjct: 204 LNMIFNEFFGWPIIMIILYSSLMV 227


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = +2

Query: 50  NRSECRKP--AVRPLGNTRATLVF 115
           NR++C KP   +R +   R  L F
Sbjct: 269 NRNDCAKPLTQIRNIRGPRKRLRF 292


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = -3

Query: 123 WSPNTSVA 100
           W+PNT+++
Sbjct: 3   WNPNTNIS 10


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,609
Number of Sequences: 336
Number of extensions: 428
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 27
effective length of database: 113,513
effective search space used:  2156747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)