Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F06
         (140 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   5.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   5.4  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    19   7.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     19   7.2  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    18   9.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    18   9.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 6   GVMLVSQNCTREKGQIGLSVESQRYVRWE 92
           G ++V+  C   KG+    ++S   V W+
Sbjct: 328 GNIMVNAMCAYAKGKDACQMDSGGPVLWQ 356


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -3

Query: 69  FRHSDRFGLFRAC 31
           F H+DR G    C
Sbjct: 258 FSHNDRLGFLTFC 270


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 54 RFGLFRACSF 25
          +FG F AC F
Sbjct: 51 KFGCFEACVF 60


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 61  LRPIWPFSRVQF*LTSIT 8
           ++ IWPF   Q    +IT
Sbjct: 147 MQKIWPFKEYQMNGNNIT 164


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = -3

Query: 123 WSPNTSVA 100
           W+PNT+++
Sbjct: 116 WNPNTNIS 123


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = -3

Query: 123 WSPNTSVA 100
           W+PNT+++
Sbjct: 116 WNPNTNIS 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,829
Number of Sequences: 438
Number of extensions: 554
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used:  2555823
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)