Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F05
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   9.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 36   TQSQIDPRAEF 4
            TQS +DP++EF
Sbjct: 1813 TQSLVDPKSEF 1823


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 285 REAIQNLNGELVHGQGITIEAAKSRK 362
           R  I NLN  L+H   +  +  K  +
Sbjct: 188 RNKISNLNTSLIHSTHLNGDIVKEHQ 213


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -2

Query: 200 RSKISVCRFIG*VPDEDFESTGARH 126
           R   +VCR    VP  +FE     H
Sbjct: 12  RPIFAVCRLFALVPYYNFEKFSLEH 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,331
Number of Sequences: 336
Number of extensions: 1266
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)