Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F05
         (375 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.1  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           22   6.5  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           22   6.5  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 174  KTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNG 311
            KT  AD RP        +  +IV  YGF   E  Q+G +     NG
Sbjct: 1313 KTVVADFRPYR------ISEEIVTYYGFEPYEQNQIGSDGRWKWNG 1352


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 174  KTTDADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNG 311
            KT  AD RP        +  +IV  YGF   E  Q+G +     NG
Sbjct: 1314 KTVVADFRPYR------ISEEIVTYYGFEPYEQNQIGSDGRWKWNG 1353


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 346 ASIVIPCP*TSSPFKF*IASRPTCSFSMWTKP*FLTISHSTT 221
           A+   P P T++ +       PT + ++W  P   T +H+ T
Sbjct: 194 ATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPT 235


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 346 ASIVIPCP*TSSPFKF*IASRPTCSFSMWTKP*FLTISHSTT 221
           A+   P P T++ +       PT + ++W  P   T +H+ T
Sbjct: 194 ATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPT 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,677
Number of Sequences: 2352
Number of extensions: 5457
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)