Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_F03
         (259 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   2.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   3.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    19   6.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    19   6.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    19   6.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    19   6.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    19   6.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    19   8.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    19   8.6  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    19   8.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   8.6  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 45  LSRNKSPGCCSRDSLSTDRIRG 110
           +S + SPG  S  SLS D + G
Sbjct: 191 VSDSLSPGIYSEQSLSPDTVFG 212


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 3.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 111 PHGCGLLTMSLSSNILVICSWT 46
           PH   L    LSS+++ I  WT
Sbjct: 203 PHA-KLYDYDLSSHVITILDWT 223


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 43  SCPGTNHQDVARETHCQ 93
           SC   N+QD +   +C+
Sbjct: 151 SCTVNNYQDASNVRNCE 167


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 43  SCPGTNHQDVARETHCQ 93
           SC   N+QD +   +C+
Sbjct: 152 SCTVNNYQDASNVRNCE 168


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 43  SCPGTNHQDVARETHCQ 93
           SC   N+QD +   +C+
Sbjct: 152 SCTVNNYQDASNVRNCE 168


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 156 SSGHTSSFIVHQK 194
           SSG T  F+ H+K
Sbjct: 244 SSGETRLFLTHRK 256


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.4 bits (38), Expect = 6.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -1

Query: 154 VYGVLDQFNEC 122
           +  ++D+FNEC
Sbjct: 219 ICNLIDEFNEC 229


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 233 HYIIINKKTL 204
           HY +IN++TL
Sbjct: 239 HYEVINRQTL 248


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 233 HYIIINKKTL 204
           HY +IN++TL
Sbjct: 165 HYEVINRQTL 174


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 130 NECNEQTPRMRSVDNESLEQH 68
           N  N       S+D+ +LEQH
Sbjct: 212 NSANSSIWSPASIDSFTLEQH 232


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.0 bits (37), Expect = 8.6
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 15  CTCSPKRTWKLSRNKSPGCCSRDSLS 92
           CTC P  T    +N+   C S   L+
Sbjct: 47  CTCKPGFTGSNCQNRINLCDSSPCLN 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,206
Number of Sequences: 336
Number of extensions: 1170
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4058134
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)