Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E24
(483 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.002
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.017
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 31 0.069
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 31 0.091
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 31 0.12
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 30 0.16
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.28
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 0.28
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.28
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 29 0.49
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 29 0.49
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 28 0.64
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 28 0.85
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 1.5
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 1.5
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 27 1.5
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.0
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 3.4
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 3.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 3.4
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 3.4
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 4.5
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 4.5
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 6.0
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 6.0
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 7.9
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 7.9
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 25 7.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 25 7.9
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.9
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 25 7.9
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 36.3 bits (80), Expect = 0.002
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +2
Query: 2 HEVKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQ 181
+E+KE S + ++ EL+N L+ + + K E Q + Q+L+R + + +K H E Q
Sbjct: 476 NELKEKSALIDKKDQELNN-LREQIKEQK-KVSESTQSSLQSLQRDILNEKKKHEVYESQ 533
Query: 182 ATALHEKLQTAIQNTLKESQNLA 250
L +LQT I N+ S L+
Sbjct: 534 LNELKGELQTEISNSEHLSSQLS 556
Score = 30.7 bits (66), Expect = 0.12
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Frame = +2
Query: 2 HEVKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQ 181
H ++EG + ++++ELS+ L+ A K K L Q + R ED+ K + E
Sbjct: 1365 HSLEEGKEETKKEIAELSSRLEDNQL-ATNKLKNQLDHLNQEI-RLKEDVLK---EKESL 1419
Query: 182 ATALHEKL--QTAIQNTLKESQNLAKEVGVNMDQTSQK 289
+L E L Q +++L +++N E+ +D TS+K
Sbjct: 1420 IISLEESLSNQRQKESSLLDAKN---ELEHMLDDTSRK 1454
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 33.5 bits (73), Expect = 0.017
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Frame = +2
Query: 2 HEVKEGSDSMVQQVSELSNSL---------QGALTDAN--GKAKEVLQQARQNLERTVED 148
HE++ + +VQQV LS L QG+L +A+ + + L+ +Q E+ E
Sbjct: 1531 HELRSDKEGLVQQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKET 1590
Query: 149 LRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFV 328
A + A EK + ++N L E KE+ +Q + + DD +
Sbjct: 1591 EILA---ARSELVAEKEKTKEELENQLNEKSQRIKEL---EEQAQKNSSENTHDNIDDMI 1644
Query: 329 KHAEEVQKKVHE 364
K ++V++K+ E
Sbjct: 1645 K--QQVEEKLKE 1654
Score = 33.1 bits (72), Expect = 0.023
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Frame = +2
Query: 23 DSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP---DVEKQATAL 193
DSM ++ ELSN L+ AN K E R+ + DLR+ ++ T L
Sbjct: 835 DSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLREHQTLVLQLQSNITEL 890
Query: 194 HE--KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQ 349
+ LQ ++N L+ KE M++ + L KL AA D ++ + V+
Sbjct: 891 KQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQSKLIAANKDTTQNPDNVE 944
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.5 bits (68), Expect = 0.069
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +2
Query: 83 ANGKAKEV--LQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKESQ--- 241
A K KE+ LQQ R NLER +D+ +E+ A EK + +QN +K S+
Sbjct: 237 ARNKQKEINILQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPI 295
Query: 242 NLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAAT 373
N A G+N + + ++++ D E Q+ E A+
Sbjct: 296 NAADLEGIN-PELLPVIEEEIRSFRDQSAMKKREKQRSKDEYAS 338
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.091
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Frame = +2
Query: 92 KAKEVLQ---QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLA 250
K KE ++ Q ++ LER VE+LRK + D VE +A + + + E Q L
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 251 KEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 370
K++ T QKL K++ + H ++Q +E+A
Sbjct: 188 KDMEQENASTIQKLTSKIRELQASQLDH--DLQASQNESA 225
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.7 bits (66), Expect = 0.12
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Frame = +2
Query: 8 VKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRKAHPDVEK 178
+ + S++ V + E + L L+ K+ L++ +Q L EDLRK D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 179 Q------ATALHEKLQTAIQNTLKESQNLAKEVGV 265
+ A + +KL+ L++ ++L KE+ +
Sbjct: 1065 ELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
Score = 27.1 bits (57), Expect = 1.5
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 8 VKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQAT 187
VKE + +VQ+ S L + L +D + K E L+ + R V+DL K + +Q T
Sbjct: 189 VKE--EILVQEKSALVSDLASLQSD-HSKVCEKLEVS----SRQVQDLEKKLAGLAQQNT 241
Query: 188 ALHEKLQ 208
L+EK+Q
Sbjct: 242 ELNEKIQ 248
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 30.3 bits (65), Expect = 0.16
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +2
Query: 41 VSELSNSLQGALTDANGKAKEVLQQARQNLERTVED----LRKAHPDVEKQATALHEKLQ 208
VS+ N LQ +N K + + + N+ + + + HPDV+ QA+
Sbjct: 227 VSQQENQLQDEALTSNSKNADAIGASDANVATAPKSWADLIARNHPDVKSQAS------- 279
Query: 209 TAIQNTLKESQNLAKEVGVNMDQTSQKLAP 298
+ +T + K GVN DQT Q AP
Sbjct: 280 --VSSTASTTGQTVK--GVNADQTQQPTAP 305
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.5 bits (63), Expect = 0.28
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 163 PRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTESGIR 318
P R ++ ++RE NR T+ G + HGS LT+TG + ++
Sbjct: 15 PSRASSNTHLSREGTNRSSNVTRTV----SGRKSNHGSSLTDTGESDQLSLK 62
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 29.5 bits (63), Expect = 0.28
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +2
Query: 92 KAKEVLQQARQNLERTVEDLRKAHP--DVEKQATALHEKLQTAIQNTLKESQNLAKEVGV 265
KAK L+ ++LE D +A VEKQ +++E+L+ + + +E
Sbjct: 636 KAKGGLEVNAEDLEHLDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYRREAIP 695
Query: 266 NMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RA 388
++ +++ A + + + K +EVQ++ HE A K +A
Sbjct: 696 LWEEDAKQQAEHDREIFYEREKQRKEVQERKHEQAIKDKKA 736
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.28
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 107 LQQARQNLERTVEDLRKAHPDVEK 178
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 28.7 bits (61), Expect = 0.49
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 86 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 250
NG A+E+ A + L VE+LRKA D+E++ L + KL +N + LA
Sbjct: 66 NGNAEEIF--ANKRLRVCVEELRKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 28.7 bits (61), Expect = 0.49
Identities = 21/88 (23%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +2
Query: 38 QVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVE------KQATALHE 199
Q +E SN+ A ++ + + +E L L TV + R + + + A+ ++E
Sbjct: 550 QSNETSNTFPAASSNISSQLRE-LHTKIDELRETVSNFRADYNSIRTSLNQLEAASGINE 608
Query: 200 KLQTAIQNTLKESQNLAKEVGVNMDQTS 283
++QT ++L S ++ G QTS
Sbjct: 609 RIQTTSADSLLNSNGMSGTEGFENTQTS 636
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 28.3 bits (60), Expect = 0.64
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +1
Query: 55 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 225
QQST RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 667 QQSTVSNHHRKE----SIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQH 722
Query: 226 TKGEPEPGE 252
T+ E P +
Sbjct: 723 TRQESLPSQ 731
Score = 25.0 bits (52), Expect = 6.0
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +1
Query: 55 QQSTGCVDRRKR*S*GSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EH 225
QQ+T RK S P+ P G H+R + + ET H ++ P +H
Sbjct: 699 QQTTETKHLRKE----STPSKQPTEGQHTRQESLPSQQTTETKHLRKESIPSKQPTEGQH 754
Query: 226 TKGEPEPGE 252
+ E P +
Sbjct: 755 ARQESLPSQ 763
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 27.9 bits (59), Expect = 0.85
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Frame = +2
Query: 5 EVKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHP----DV 172
E++E S++ + SE+S + A+TD + KE+ A ++ + +KA P V
Sbjct: 31 EIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEI-NMAIESPSKKATSPKKATPAAVAPV 89
Query: 173 E-KQATALHEKLQTAIQNTLK---ESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAE 340
E A E + + N K +Q N+ Q +Q+ ++K + + +
Sbjct: 90 EATSAVDTSEAVASMTPNKRKARDPAQPKRPPSAYNLFQKNQR--SEIKESLGEKSNDVK 147
Query: 341 EVQKKVHE 364
EV K +HE
Sbjct: 148 EVNKAMHE 155
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 1.5
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +2
Query: 110 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 241
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.1 bits (57), Expect = 1.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 126 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEP 16
F C S +L+LP +N P R+ D +C ++ ++P
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKP 232
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 27.1 bits (57), Expect = 1.5
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 74 LTDANGKAKEVLQQARQNLERTVEDLRKAHPD---VEKQATALHEKLQTAIQNTLKESQN 244
+ +A KA++ L+Q + E L K H + E++ + EKL ++ K S+
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 245 L 247
L
Sbjct: 112 L 112
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.0
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 131 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 238
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 86 NGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 214
N +K L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 33 NQLSKLKLEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.8 bits (54), Expect = 3.4
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Frame = +2
Query: 2 HEVKEGSDSMVQQVSELSNSLQGALTDANG------KAKEVLQQARQNLERTVEDLRKAH 163
+ KE SD + + E+ N L+ L+ + + Q N+ ++ + ++
Sbjct: 407 NSTKENSDYLKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANIT-SINERKENL 465
Query: 164 PDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTS 283
D K KL+++I+N + K +G MD+ +
Sbjct: 466 TDKRKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNT 505
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 3.4
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 137 TVEDLRKAHPDVEKQATALHEKLQTAIQNT-LKESQNLAKEVGVNMDQTSQKLAPKLKAA 313
++ED + P ++ K + QN K++ K+ G+N +QTS + P ++
Sbjct: 1551 SLEDSNRQKPFNGEKFRRFSSKSRRGSQNRDSKKTGKARKDKGINNNQTSPQNKPSKESL 1610
Query: 314 YDDFVKHAEEV 346
D + + ++V
Sbjct: 1611 KSDTISNEKKV 1621
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 3.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 74 LTDANGKAKEVLQQARQN 127
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 4.5
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 71 ALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQ-NTLKESQNL 247
ALT A + Q E+T++DL + ++A E+LQ A Q N S+ L
Sbjct: 82 ALTGAPIRIVTTTNARIQPDEKTLQDLLEQRQVALREAREAEEELQRARQYNDRSTSEAL 141
Query: 248 AKEVGVNMDQTSQKLA-PKLKAAYDDFVKHAEEVQKKVHEAATKQ*RAL 391
E +LA + + A + A +K+ E A + AL
Sbjct: 142 ELEARAKKAAQDAELASERAREAQSSIERSASLREKQAREEAERAATAL 190
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +2
Query: 5 EVKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 139
E +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 372 ERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.0 bits (52), Expect = 6.0
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 173 EKQATALHEKLQTAIQNTLKE--SQ-NLAKEVGVNMDQTSQKLAPKLKAAYD 319
EKQ HEK+ ++ LKE SQ N AK++ ++ +Q + K+ ++
Sbjct: 234 EKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILDKMNDEFN 285
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 6.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 129 WSAQSRISARRTPTSRNKPPHYTRSCKPP 215
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 7.9
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -1
Query: 219 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSL 97
W+ + S + F T+G R S + FWR + +
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGI 145
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 24.6 bits (51), Expect = 7.9
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 14 EGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRKAHPDVEKQATAL 193
E SD ++ ++ LS+ L L DAN L+ L+ ++ L A P+V+++A
Sbjct: 12 ESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQQEAVRC 69
Query: 194 HEKLQTAI-QNTLKES-QNLAKEV 259
+ + I Q+ LK + +NL V
Sbjct: 70 VAIISSKIPQDKLKSTVENLLSGV 93
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 108 STSLALPFASVNAPCRLLDNSETCCTMESEPSFTSC 1
STS+ P+ SV LDNS+ +++E + C
Sbjct: 182 STSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDIC 217
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 24.6 bits (51), Expect = 7.9
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 128 LERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQN---LAKEVGVNMDQTSQKLAP 298
LE+T+EDL+ A D K L + + + + T K + L +E + +D+ +
Sbjct: 926 LEKTIEDLKLALQDELKNRNLLMDDISSYNKQTTKLQEKIKWLERERSILIDELESYRSN 985
Query: 299 KLKAAYDDFVKHAEEVQKKVHE 364
+ ++ V+ E+++++ E
Sbjct: 986 QFN-YQNNLVQDKNELEERLKE 1006
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 7.9
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +1
Query: 109 PTSSP--ELGAHSRGSPQG 159
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 24.6 bits (51), Expect = 7.9
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +2
Query: 98 KEVLQQARQNLERTVEDLRK-AHPDVEKQATALHEKLQTAIQ-NTLKESQNLAK---EVG 262
K + ++ R L +T R PD +K + HE++ Q + L+E + + E G
Sbjct: 242 KRMSKEERNLLNKTKAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQG 301
Query: 263 --VNMDQTSQKLAPKLKAAYDDFVKHAE 340
D+T + L K A+YD ++H +
Sbjct: 302 HKYERDKTQKFLLSKASASYDKQLRHVK 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,749,197
Number of Sequences: 5004
Number of extensions: 30743
Number of successful extensions: 168
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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