Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E23
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 169 7e-43
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 163 6e-41
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 159 6e-40
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 159 6e-40
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 155 9e-39
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 154 2e-38
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 111 2e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 111 2e-25
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 79 1e-15
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 79 2e-15
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 79 2e-15
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 77 7e-15
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 77 7e-15
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 77 7e-15
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 75 2e-14
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 75 2e-14
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 75 2e-14
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 74 5e-14
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 74 5e-14
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 74 5e-14
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 73 7e-14
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 67 4e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 67 4e-12
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 67 6e-12
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 57 5e-09
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 26 9.8
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 26 9.8
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 26 9.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 26 9.8
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 26 9.8
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 26 9.8
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 169 bits (411), Expect = 7e-43
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGG YV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PRA LVDLEPGTMDSVR+GPF
Sbjct: 61 PRACLVDLEPGTMDSVRAGPF 81
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 163 bits (395), Expect = 6e-41
Identities = 73/81 (90%), Positives = 76/81 (93%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MREIVHVQAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GG YV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PRAVLVDLEPGTMDSVRSGPF
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPF 81
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 159 bits (387), Expect = 6e-40
Identities = 71/81 (87%), Positives = 75/81 (92%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA YV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PRAVLVDLEPGTMDSVRSGPF
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPF 81
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 159 bits (387), Expect = 6e-40
Identities = 71/81 (87%), Positives = 75/81 (92%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA YV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PRAVLVDLEPGTMDSVRSGPF
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPF 81
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 155 bits (377), Expect = 9e-39
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MREIVHVQAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ G YV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PRAVLVDLEPGTMDSVRSGPF
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPF 81
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 154 bits (374), Expect = 2e-38
Identities = 68/81 (83%), Positives = 75/81 (92%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MREIVHVQAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ G YV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PRAVLVDLEPGTMDSVRSGPF
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPF 81
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 111 bits (268), Expect = 2e-25
Identities = 49/78 (62%), Positives = 60/78 (76%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
M+EI++VQ GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G YV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 362 PRAVLVDLEPGTMDSVRS 415
PRA+LVDL+P +++ VRS
Sbjct: 61 PRAILVDLDPESINYVRS 78
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 111 bits (268), Expect = 2e-25
Identities = 49/78 (62%), Positives = 60/78 (76%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
M+EI++VQ GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G YV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 362 PRAVLVDLEPGTMDSVRS 415
PRA+LVDL+P +++ VRS
Sbjct: 61 PRAILVDLDPESINYVRS 78
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 79.4 bits (187), Expect = 1e-15
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +2
Query: 185 REIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGT 355
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GG
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 356 YVPRAVLVDLEPGTMDSVRSGPF 424
+VPR + VDLEP +D VR+G +
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTY 89
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 78.6 bits (185), Expect = 2e-15
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PR++ VDLEP +D +R+G +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 78.6 bits (185), Expect = 2e-15
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PR++ VDLEP +D +R+G +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 76.6 bits (180), Expect = 7e-15
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PR++ VDLEP +D +R+G +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 76.6 bits (180), Expect = 7e-15
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGT 355
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 356 YVPRAVLVDLEPGTMDSVRSGPF 424
+VPRA+ VDLEP +D VR+G +
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTY 83
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 76.6 bits (180), Expect = 7e-15
Identities = 32/81 (39%), Positives = 47/81 (58%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PR++ VDLEP +D +R+G +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTY 81
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGT 355
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 356 YVPRAVLVDLEPGTMDSVRSGPF 424
+VPRAV+VDLEP +D +R+G +
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTY 83
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGT 355
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 356 YVPRAVLVDLEPGTMDSVRSGPF 424
+VPRAV+VDLEP +D +R+G +
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTY 83
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGT 355
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 356 YVPRAVLVDLEPGTMDSVRSGPF 424
+VPRAV+VDLEP +D +R+G +
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTY 83
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 73.7 bits (173), Expect = 5e-14
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PR++ VDLEP +D +R+G +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNY 81
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 73.7 bits (173), Expect = 5e-14
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +2
Query: 179 KMREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 352
+ RE++ + GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 353 TYVPRAVLVDLEPGTMDSVRSGPF 424
+VPRA++VDLEP +D +R+G +
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTY 88
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 73.7 bits (173), Expect = 5e-14
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PR++ VDLEP +D +R+G +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNY 81
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 73.3 bits (172), Expect = 7e-14
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +2
Query: 185 REIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGTY 358
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G +
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 359 VPRAVLVDLEPGTMDSVRSGPF 424
VPRAV+VDLEP +D +R+G +
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTY 82
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 185 REIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGTYV 361
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ G +V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PRA+ VDLEP +D +R+G +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVY 86
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 67.3 bits (157), Expect = 4e-12
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +2
Query: 191 IVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYVPRA 370
++ V GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 371 VLVDLEPGTMDSVRSGP 421
VLVDLEP ++ + P
Sbjct: 66 VLVDLEPRVINGMMQSP 82
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 67.3 bits (157), Expect = 4e-12
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +2
Query: 191 IVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYVPRA 370
++ V GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 371 VLVDLEPGTMDSVRSGP 421
VLVDLEP ++ + P
Sbjct: 66 VLVDLEPRVINGMMQSP 82
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 66.9 bits (156), Expect = 6e-12
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +2
Query: 182 MREIVHVQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYV 361
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G +V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGT-SMEPDGNSGSLGTFFSDTGYGRHV 59
Query: 362 PRAVLVDLEPGTMDSVRSGPF 424
PR++ VDLEP +D +R+G +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAY 80
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 57.2 bits (132), Expect = 5e-09
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Frame = +2
Query: 260 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGTYVPRAVLVDLEPGTMDSVRSGPF 424
EHGI P G YH + D + E IN ++ E +GG +VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTY 61
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 248 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGTYVPRAVLVDL 385
I S+ H I T + H DS R + GG + R +L+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>Z68217-5|CAC70098.1| 166|Caenorhabditis elegans Hypothetical
protein F58G6.7 protein.
Length = 166
Score = 26.2 bits (55), Expect = 9.8
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +3
Query: 291 MVTLTYSWSVLMCITMKHPEALMYLAPFL 377
+V++TY+W + + + H +L P +
Sbjct: 125 LVSMTYNWPIFLSLLAGHTTGYFFLGPMM 153
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 3 PPGGGALNYGSPG 41
PPGGG N G+PG
Sbjct: 357 PPGGGTFNDGAPG 369
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 3 PPGGGALNYGSPG 41
PPGGG N G+PG
Sbjct: 356 PPGGGTFNDGAPG 368
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 3 PPGGGALNYGSPG 41
PPGGG N G+PG
Sbjct: 356 PPGGGTFNDGAPG 368
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 3 PPGGGALNYGSPG 41
PPGGG N G+PG
Sbjct: 357 PPGGGTFNDGAPG 369
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 26.2 bits (55), Expect = 9.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 3 PPGGGALNYGSPG 41
PPGGG N G+PG
Sbjct: 393 PPGGGTFNDGAPG 405
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 138 SSNVDSSIRSVELLKVRQNSKRTAQPLCRIPAARGIHSL 22
S +VD S S ++L VR+N RTA + P A H +
Sbjct: 692 SLSVDKSKESEKMLVVRKNDSRTANYKEKAPEAVKDHEI 730
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,730,198
Number of Sequences: 27780
Number of extensions: 215775
Number of successful extensions: 608
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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