Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E23
         (426 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.82 
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              21   4.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   4.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.82
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 309 CKSESPWYAPVGSIPC 262
           CK +  WY P G   C
Sbjct: 234 CKGDGKWYLPSGGCHC 249


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 72  TAQPLCRIPAARGIHSLERR 13
           T + LC      G+H+LER+
Sbjct: 162 TLRVLCMTDGKEGMHTLERQ 181


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 131 TLIVLSGRLNF*K*DKILSVPPNRCAE 51
           +LIVL+  L      K ++ PP  CA+
Sbjct: 294 SLIVLTSALQEMNKSKSITEPPKNCAD 320



 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 124 INVTREILSNNFY*LHINKDEGNRPRPGRTMRKPD 228
           ++V R    N    + ++ +E N   PGR   KP+
Sbjct: 372 VSVGRYFYPNGTEKMTLSVNESNITWPGRLQTKPE 406


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 332 NTH*YAPAVSQSHHGMRQWDQ 270
           N+  ++   S  HHG + W Q
Sbjct: 393 NSRGHSGQSSSHHHGSKSWTQ 413


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 53 EFLQPGGSI 27
          EFL PGGS+
Sbjct: 69 EFLNPGGSV 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,423
Number of Sequences: 438
Number of extensions: 2416
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)