Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E21
         (176 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058308-1|AAL13537.1|  828|Drosophila melanogaster GH07092p pro...    28   2.0  
AE014296-1712|AAF50221.1|  889|Drosophila melanogaster CG6761-PA...    28   2.0  

>AY058308-1|AAL13537.1|  828|Drosophila melanogaster GH07092p
           protein.
          Length = 828

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -2

Query: 166 YISKFHRKL*SYRKITYKFW-HCE*I--MKTKRQFVYKQYFYYSFLSNTPSFL 17
           YI +  ++L S+RK+ +K W HC  +     +  F   Q  +  F    P+FL
Sbjct: 476 YIVQLFKELKSWRKVYWKLWGHCHYLYCCSCEAHFPVYQMHWCRFHPEAPNFL 528


>AE014296-1712|AAF50221.1|  889|Drosophila melanogaster CG6761-PA
           protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -2

Query: 166 YISKFHRKL*SYRKITYKFW-HCE*I--MKTKRQFVYKQYFYYSFLSNTPSFL 17
           YI +  ++L S+RK+ +K W HC  +     +  F   Q  +  F    P+FL
Sbjct: 537 YIVQLFKELKSWRKVYWKLWGHCHYLYCCSCEAHFPVYQMHWCRFHPEAPNFL 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,120,908
Number of Sequences: 53049
Number of extensions: 73000
Number of successful extensions: 126
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 24,988,368
effective HSP length: 39
effective length of database: 22,919,457
effective search space used: 435469683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)