Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E20
(225 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 26 0.049
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 1.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 1.4
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 1.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 2.5
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 2.5
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 19 5.7
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 9.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 9.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 9.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 19 9.9
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 26.2 bits (55), Expect = 0.049
Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 17 AIPRTDYVERF--VIKNFTRRYLNQ 85
A P DY+ R+ V+KNF RY+++
Sbjct: 439 ADPNGDYIRRYLPVLKNFPTRYIHE 463
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 1.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 212 NFYYIYQLIFVSYHLSKALGIYSDKINSQIYKF 114
N YY Y + Y +S + +I Q+Y F
Sbjct: 231 NAYYYYMREMLPYWMSSSQYHMPKEIRGQLYYF 263
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 1.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 212 NFYYIYQLIFVSYHLSKALGIYSDKINSQIYKF 114
N YY Y + Y +S + +I Q+Y F
Sbjct: 231 NAYYYYMREMLPYWMSSSQYHMPKEIRGQLYYF 263
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.0 bits (42), Expect = 1.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 164 KALGIYSDKINSQIYKF*FLV 102
+A IY DK++ + F FL+
Sbjct: 353 RATAIYIDKVSRFFFPFSFLI 373
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 2.5
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -2
Query: 188 IFVSYHLSKALGIYSDKINSQIYKF*FLV 102
+++ +HL+ + + D+ Q +K FLV
Sbjct: 260 LYLPFHLTLSFRDFRDRTTEQQHKAMFLV 288
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 20.6 bits (41), Expect = 2.5
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -2
Query: 188 IFVSYHLSKALGIYSDKINSQIYKF*FLV 102
+++ +HL+ + + D+ Q +K FLV
Sbjct: 255 LYLPFHLTLSFRDFRDRTTEQQHKAMFLV 283
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 19.4 bits (38), Expect = 5.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 215 QNFYYIYQLIFVSYHLSK 162
QN+ Y +QLI Y + K
Sbjct: 85 QNYPYEWQLILRRYKIMK 102
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 209 FYYIYQLIFVSYHLSK 162
FY IY+ I YH K
Sbjct: 418 FYRIYKRIIDYYHSYK 433
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 18.6 bits (36), Expect = 9.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -2
Query: 209 FYYIYQLIFVSYHLSK 162
FY IY+ I YH K
Sbjct: 418 FYRIYKRIIDYYHSYK 433
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 18.6 bits (36), Expect = 9.9
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 123 NLTINFVGINT 155
NLT+NFV +T
Sbjct: 323 NLTVNFVDQST 333
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 18.6 bits (36), Expect = 9.9
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 215 QNFYYIYQLI 186
QNFYYI + +
Sbjct: 411 QNFYYIEEYL 420
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,191
Number of Sequences: 438
Number of extensions: 1034
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3533460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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