Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E18
(208 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 36 0.004
04_03_0032 + 9935414-9935602,9936129-9936392 34 0.014
04_03_0027 + 9667508-9668800 34 0.018
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 33 0.024
04_01_0187 - 2153546-2154520,2154581-2155858 32 0.055
12_01_1034 - 10638984-10639376,10639905-10640093 31 0.13
09_02_0521 + 10162396-10162587,10162687-10163679 31 0.13
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 31 0.13
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 31 0.13
07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188 30 0.29
03_05_0583 - 25838016-25838684 30 0.29
10_04_0010 - 7487455-7489490,7489569-7489980 29 0.39
10_02_0059 + 4785858-4786988 29 0.39
03_02_1029 - 13488535-13493037 29 0.51
03_04_0215 + 18692662-18692862,18693049-18693276 27 1.6
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 27 2.1
11_01_0281 + 2086674-2087652,2089200-2089483 27 2.1
09_02_0555 - 10588685-10592038 27 2.1
11_01_0277 + 2060328-2061061,2061360-2061420,2061560-2061679,206... 27 2.7
02_01_0210 + 1402037-1402066,1402449-1402544,1402611-1403033,140... 27 2.7
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 27 2.7
08_02_0107 + 12494650-12495270,12507463-12508146,12508325-125084... 26 3.6
04_01_0156 - 1780395-1780686,1780773-1781248,1781263-1781678,178... 26 3.6
02_05_0392 - 28567172-28567261,28567480-28567561,28567730-285677... 26 3.6
01_01_0420 + 3175544-3176696,3177035-3178581,3179623-3179688,317... 26 3.6
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 26 4.8
06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808 26 4.8
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 25 6.3
01_07_0135 + 41342118-41342181,41342326-41343260 25 6.3
02_05_0430 - 28923784-28923830,28923931-28924341,28924552-289249... 25 8.4
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
++F++ K+ L +A +L P+P+ + DAS +G VL Q P FS++ N
Sbjct: 494 QSFQELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKIPTFPESPFSQEKNL 553
Query: 185 AQRKYS 202
K S
Sbjct: 554 KSSKAS 559
>04_03_0032 + 9935414-9935602,9936129-9936392
Length = 150
Score = 34.3 bits (75), Expect = 0.014
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2
Query: 86 MTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 202
M DASD A+GAVL Q D + + SK L AQ Y+
Sbjct: 1 MCDASDFAMGAVLGQTKDRKHQAIAYASKTLTGAQLNYA 39
>04_03_0027 + 9667508-9668800
Length = 430
Score = 33.9 bits (74), Expect = 0.018
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2
Query: 86 MTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 202
M DAS+ A+GAVL Q D + + SK L AQ YS
Sbjct: 1 MCDASNFAVGAVLGQTKDRKQHAIAYASKTLTGAQLNYS 39
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 33.5 bits (73), Expect = 0.024
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
++F++ K+ L +A +L P+P+ + DAS +G VL Q G V + + S++L
Sbjct: 1026 QSFQELKNRLVSAPILTLPDPKKGFQVYCDASKLGLGCVLMQ---DGKV-VAYASRQLRP 1081
Query: 185 AQRKY 199
++ Y
Sbjct: 1082 HEKNY 1086
>04_01_0187 - 2153546-2154520,2154581-2155858
Length = 750
Score = 32.3 bits (70), Expect = 0.055
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQ 130
++F++ K+ L +A +L P+P+ + DAS +G VL Q
Sbjct: 151 QSFQELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQ 192
>12_01_1034 - 10638984-10639376,10639905-10640093
Length = 193
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 86 MTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 202
M DASD A+ AVL Q D + + + SK AQ Y+
Sbjct: 1 MCDASDFAVSAVLGQTKDKKHLAITYASKIFTRAQLNYA 39
>09_02_0521 + 10162396-10162587,10162687-10163679
Length = 394
Score = 31.1 bits (67), Expect = 0.13
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVL-QQKSDSGWV-----PLGFF 166
+AFED K L +LA P P+ L + + + VL ++ + G + P+ F
Sbjct: 261 KAFEDFKKLLTTPPVLASPRPQEPLLLYVSGTSQVVSTVLVVEREEEGHIQKVQRPIYFV 320
Query: 167 SKKLNNAQRKY 199
S+ L +++ +Y
Sbjct: 321 SEVLADSKTRY 331
>04_01_0293 +
3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 31.1 bits (67), Expect = 0.13
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 2 HEAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLN 181
+ +F++ K+ L A +L P+P+ + DAS +G VL Q G V + + S++L
Sbjct: 773 YRSFQELKNHLILAPILILPDPKKGFQVYCDASKLGLGCVLMQ---DGKV-VAYASRQLR 828
Query: 182 NAQRKY 199
++ Y
Sbjct: 829 PHEKNY 834
>04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 31.1 bits (67), Expect = 0.13
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
EAF K L+N +L P P L + A+ ++ V+ + + P+ + S+ L++
Sbjct: 1061 EAFVALKRYLSNPPVLVAPKPNEELFLYIAATPYSVSTVIVVEREKVQRPVYYVSEALHD 1120
Query: 185 AQRKY 199
A+ +Y
Sbjct: 1121 AKTRY 1125
>07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188
Length = 736
Score = 29.9 bits (64), Expect = 0.29
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVL 124
+AFED K L +LA P+P+ L + A+ + VL
Sbjct: 131 KAFEDFKKLLTTPPVLASPHPQEPLLLYVSATSQVVSTVL 170
>03_05_0583 - 25838016-25838684
Length = 222
Score = 29.9 bits (64), Expect = 0.29
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 117 APIALSEASVMMARCARGFG-CASKVALAKPDLLSSKASC 1
AP+A+ A+ RC RG CA+++ L P L +KA C
Sbjct: 131 APMAIVPAAAGGRRCPRGGPRCAAEITLQCPGELRAKAGC 170
>10_04_0010 - 7487455-7489490,7489569-7489980
Length = 815
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQK 133
+AF+ K L ++ +L P+ R + DAS +G VL Q+
Sbjct: 195 KAFQTLKEKLVSSPVLILPDTRKDFMVYCDASRQGLGCVLMQE 237
>10_02_0059 + 4785858-4786988
Length = 376
Score = 29.5 bits (63), Expect = 0.39
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQ 130
+AF+ K L ++ +L P+ R + DAS +G VL Q
Sbjct: 265 KAFQTLKEKLVSSPVLILPDTRKDFVVYCDASRQGLGCVLMQ 306
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 29.1 bits (62), Expect = 0.51
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQ 130
+AF+ K L ++ +L P+ R + DAS +G VL Q
Sbjct: 835 KAFQTLKEKLVSSPVLILPDTRKDFMVYCDASRQGLGCVLMQ 876
>03_04_0215 + 18692662-18692862,18693049-18693276
Length = 142
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 23 KSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSD 139
+ L +A ++ P+ IM +ASD +GAVL Q D
Sbjct: 67 EESLISAPIIQPPDWSLPFEIMCNASDFTVGAVLGQTKD 105
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 2 HEAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQ 130
+ +FE+ K L +A +L P+ DAS +G VL Q
Sbjct: 18 NRSFEELKRRLVSAPVLILPDQTKDFQAYCDASRQGLGCVLMQ 60
>11_01_0281 + 2086674-2087652,2089200-2089483
Length = 420
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 53 AHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLG 160
A +P + A+ DASD+ AV D G PLG
Sbjct: 53 ASASPFSDAALAADASDADASAVAAPPDDDGTNPLG 88
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQ 130
+AF+ K L ++ +L P+ + DAS +G VL Q
Sbjct: 452 KAFQTLKEKLVSSPVLILPDTHKDFMVYCDASRQGLGCVLMQ 493
>11_01_0277 +
2060328-2061061,2061360-2061420,2061560-2061679,
2061947-2062112,2062229-2062635
Length = 495
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 41 ATLLAHPN-PRAHLAIMTDASDSAIGAVLQQKSDSGWVPLG 160
A+ A P+ P + A+ DASD+ AV D G PLG
Sbjct: 46 ASASAEPDTPFSDAALAADASDADASAVAAPPDDDGANPLG 86
>02_01_0210 +
1402037-1402066,1402449-1402544,1402611-1403033,
1403126-1403215,1403330-1403401,1403851-1403980,
1404172-1404269
Length = 312
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 80 AIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKL 178
A+M ASD+A A + +SGW L ++KL
Sbjct: 65 AMMPSASDAAAAAAALELQESGWEELRREARKL 97
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 49 ACTPKS-TSTSSHHDRCLRQCYRRSVAAKIRFR 144
A TP+S +TSSH D R+ R V A FR
Sbjct: 716 ATTPRSFDTTSSHQDASFRESLPRQVRAPAVFR 748
>08_02_0107 +
12494650-12495270,12507463-12508146,12508325-12508472,
12508493-12508584,12508713-12509426
Length = 752
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQK 133
+AF+ K L ++ +L P+ + DAS +G +L Q+
Sbjct: 223 KAFQTLKEKLVSSPVLILPDTHKDFLVYCDASRQGLGCMLMQE 265
>04_01_0156 -
1780395-1780686,1780773-1781248,1781263-1781678,
1781904-1782111
Length = 463
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 14 EDSKSGLANATLLAHPNPRAHLAIMTDASDS 106
E S G + L HP PR L+ + ASD+
Sbjct: 231 EASSDGTPTSPALRHPPPRKRLSSLPPASDA 261
>02_05_0392 -
28567172-28567261,28567480-28567561,28567730-28567776,
28568020-28568134,28568405-28568649,28568728-28568799,
28568902-28568982,28569083-28569140,28569231-28569359,
28570124-28570293
Length = 362
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASD 103
+ + S+SG + A L+A R H + DASD
Sbjct: 119 KVYPGSRSGASEADLMAVNELRTHAFLQNDASD 151
>01_01_0420 +
3175544-3176696,3177035-3178581,3179623-3179688,
3179892-3179999
Length = 957
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGW 148
+A+E S AN+ L PN ++ +T+ D +G V S + W
Sbjct: 188 DAYETLISQTANSIWLIEPNFETFISKLTNLRDLHLGYVDMSNSGAQW 235
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVL 124
+AF+ K L ++ +L P+ R + DAS +G V+
Sbjct: 322 KAFQTLKEKLVSSPVLILPDTRKDFMVYCDASRQGLGMVM 361
>06_03_0787 + 24598823-24598973,24600213-24600534,24602499-24602808
Length = 260
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 95 ASDSAIGAVLQQKSDSGWVPLG 160
A+D + AV + S +GW+P+G
Sbjct: 186 AADGEVAAVKVKGSRTGWIPMG 207
>08_02_0678 -
19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 64 STSTSSHHDRCLRQCYRRSVAAKIRFRL 147
STST H R L QC S +R RL
Sbjct: 692 STSTYEHISRFLAQCGEASAVDALRVRL 719
>01_07_0135 + 41342118-41342181,41342326-41343260
Length = 332
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 80 AIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQ 190
A + DA +G V+ S++GW G F ++NAQ
Sbjct: 239 AALEDAGAPDVGVVV---SETGWPSAGGFGASVSNAQ 272
>02_05_0430 - 28923784-28923830,28923931-28924341,28924552-28924963,
28925000-28925542,28925790-28925884,28926003-28927033,
28927304-28927452,28927483-28927523,28927594-28928206
Length = 1113
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 49 ACTPKS-TSTSSHHDRCLRQCYRRSVAAKIRFRLGSSRIFLEETEQRS 189
AC + T HD CL + + + + +R + +F E T+ R+
Sbjct: 998 ACEKRGLVETDKSHDDCLNEAFTFQMPSALRRLFATILVFCEVTDIRA 1045
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,968,773
Number of Sequences: 37544
Number of extensions: 74034
Number of successful extensions: 265
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 14,793,348
effective HSP length: 48
effective length of database: 12,991,236
effective search space used: 259824720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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