Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_E18
(208 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 48 2e-06
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 46 1e-05
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 46 1e-05
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 45 1e-05
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 44 3e-05
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 44 3e-05
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 44 4e-05
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 44 4e-05
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 44 4e-05
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 43 7e-05
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 43 7e-05
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 42 2e-04
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 41 2e-04
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 41 3e-04
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 41 3e-04
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 39 0.001
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 37 0.003
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 37 0.003
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 37 0.004
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 37 0.004
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 36 0.010
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 32 0.13
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 32 0.13
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 32 0.13
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 32 0.13
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 32 0.13
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 32 0.13
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 31 0.22
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 31 0.29
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 30 0.38
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 29 1.2
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 29 1.2
AY075502-1|AAL68311.1| 431|Drosophila melanogaster RE52190p pro... 27 4.7
AE014298-1412|AAF46555.2| 431|Drosophila melanogaster CG34104-P... 27 4.7
AE014298-1411|ABI30973.1| 582|Drosophila melanogaster CG34104-P... 27 4.7
AY113248-1|AAM29253.1| 683|Drosophila melanogaster AT13591p pro... 26 8.3
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 47.6 bits (108), Expect = 2e-06
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
+AFE K+ L+N +L HP+ + TDAS+ A+GAVL Q S P+ F S+ L++
Sbjct: 593 DAFEQCKTLLSNDPILIHPDFEKPFILTTDASNFALGAVLSQGSLQNDRPVCFASRTLSD 652
Query: 185 AQRKYS 202
+ YS
Sbjct: 653 TEVNYS 658
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 11 FEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVL-QQKSDSGWVPLGFFSKKLNNA 187
F K L + +LA N + + DAS S GAVL Q+K D W P+ FFSK+ +
Sbjct: 991 FNMLKDKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQKKEDQKWHPVSFFSKRTTDI 1050
Query: 188 QRKYSPY 208
+ KY +
Sbjct: 1051 ESKYHSF 1057
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 45.6 bits (103), Expect = 1e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
++F D KS L ++ +LA P + TDAS+ AIGAVL Q P+ + S+ LN
Sbjct: 411 QSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNK 470
Query: 185 AQRKYS 202
+ Y+
Sbjct: 471 TEENYA 476
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = +2
Query: 8 AFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNA 187
AFE K L + TLL +P+ R I+TDAS A GAVL Q + +P+ + S+
Sbjct: 182 AFEYLKENLMHPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGIQLPIAYASRSFTKG 241
Query: 188 QRKYS 202
+ S
Sbjct: 242 ESNKS 246
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +2
Query: 8 AFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNA 187
AFE K L N TLL +P+ I+TDAS A GAVL Q + +P+ + S+
Sbjct: 487 AFEHLKKQLMNPTLLKYPDFSKEFCIITDASKEACGAVLTQNYNGIHLPVAYASRSFTKG 546
Query: 188 QRKYS 202
+ S
Sbjct: 547 ESNKS 551
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 44.0 bits (99), Expect = 3e-05
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +2
Query: 8 AFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNA 187
AFE K L TLL +P+ R I+TDAS A GAVL Q + +P+ + S+
Sbjct: 182 AFEYLKENLMYPTLLQYPDFRKEFCIITDASKQACGAVLTQNRNGIQLPIAYASRSFTKG 241
Query: 188 QRKYS 202
+ S
Sbjct: 242 ESNKS 246
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 43.6 bits (98), Expect = 4e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
+AFE K+ L+N +L +P+ + TDAS+ AIGAVL Q P+ F S+ L+
Sbjct: 480 KAFEYCKTLLSNDPILQYPDFTKPFTLTTDASNFAIGAVLSQGPVHSDRPVCFASRTLSA 539
Query: 185 AQRKYS 202
A+ YS
Sbjct: 540 AETNYS 545
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 43.6 bits (98), Expect = 4e-05
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAH-PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLN 181
EAF+ KS L + ++ H P+ + + TDAS+ A+GAVL Q++ P+ F S+ L+
Sbjct: 483 EAFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENR----PISFLSRTLS 538
Query: 182 NAQRKYS 202
A+ Y+
Sbjct: 539 KAEENYA 545
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 43.6 bits (98), Expect = 4e-05
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAH-PNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLN 181
EAF+ KS L + ++ H P+ + + TDAS+ A+GAVL Q++ P+ F S+ L+
Sbjct: 327 EAFKKLKSSLVSPDVILHYPDFKKEFHLTTDASNFAVGAVLSQENR----PISFLSRTLS 382
Query: 182 NAQRKYS 202
A+ Y+
Sbjct: 383 KAEENYA 389
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 42.7 bits (96), Expect = 7e-05
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
+AF KS L N TLL +P+ I TDAS A GAVL Q + +P+ + S+
Sbjct: 592 KAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTK 651
Query: 185 AQRKYS 202
+ S
Sbjct: 652 GESNKS 657
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 42.7 bits (96), Expect = 7e-05
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
+AF KS L N TLL +P+ I TDAS A GAVL Q + +P+ + S+
Sbjct: 355 KAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTK 414
Query: 185 AQRKYS 202
+ S
Sbjct: 415 GESNKS 420
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +2
Query: 2 HEAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLN 181
++AFE K+ L TLL +P+ I TDAS A GAVL Q + +P+ + S+
Sbjct: 346 NDAFEYLKTELMKPTLLQYPDFGKEFCITTDASKQACGAVLTQDHNGQQLPVAYASRMFT 405
Query: 182 NAQRKYS 202
+ S
Sbjct: 406 QGESNKS 412
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
EAF+ K ++N +L P+ + + TDAS+ A+GAVL Q P+ + S+ LN+
Sbjct: 432 EAFKRLKLLISNDPILRSPDFKKKFVLTTDASNVALGAVLSQDGH----PISYISRTLND 487
Query: 185 AQRKYS 202
+ YS
Sbjct: 488 HETNYS 493
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
EAFE K+ + +L P+ + TDAS+ A+GAVL Q P+ F S+ LN+
Sbjct: 484 EAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGH----PISFISRTLND 539
Query: 185 AQRKYS 202
+ YS
Sbjct: 540 HELNYS 545
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +2
Query: 8 AFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNA 187
AFE K + + +L HP+ + ++ TDAS+ AIGAVL Q+ P+ + S+ LN
Sbjct: 474 AFEKLKVLITSDPILIHPDFKKSFSLTTDASNFAIGAVLSQEHK----PICYASRTLNEH 529
Query: 188 QRKYS 202
+ YS
Sbjct: 530 EVNYS 534
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
EAF+ K ++ +L PN + TDAS+ A+GAVL Q P+ + S+ LN
Sbjct: 447 EAFQKLKLLISEDPILKIPNFERKFVLTTDASNVALGAVLSQDGH----PISYISRTLNE 502
Query: 185 AQRKYS 202
+ YS
Sbjct: 503 HEVNYS 508
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 23 KSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 202
K L N +L + A + TDAS +GAVL QK + + P+ F+S+K A+
Sbjct: 767 KEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKFEGSFHPVCFWSRKTTKAESNRH 826
Query: 203 PY 208
Y
Sbjct: 827 SY 828
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 23 KSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 202
K L N +L + A + TDAS +GAVL QK + + P+ F+S+K A+
Sbjct: 461 KEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKFEGSFHPVCFWSRKTTKAESNRH 520
Query: 203 PY 208
Y
Sbjct: 521 SY 522
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 36.7 bits (81), Expect = 0.004
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +2
Query: 8 AFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNA 187
AF+ K ++ +L P+ + TDASD A+GAVL Q PL + S+ LN
Sbjct: 486 AFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGH----PLSYISRTLNEH 541
Query: 188 QRKYS 202
+ YS
Sbjct: 542 EINYS 546
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 36.7 bits (81), Expect = 0.004
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
EAF+ K + + ++ +P+ I+TDAS+ A+GAVL Q + + + S+ L N
Sbjct: 410 EAFQKLKILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQDNK----VISYASRSLKN 465
Query: 185 AQRKYS 202
+ YS
Sbjct: 466 HELNYS 471
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 35.5 bits (78), Expect = 0.010
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +2
Query: 5 EAFEDSKSGLANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
E+FE K + + +L +P+ ++ TDAS+ AIGAVL Q P+ + S+ LN
Sbjct: 558 ESFEKLKVLITSDPILIYPDFSKPFSLTTDASNVAIGAVLSQNHK----PVCYASRTLNE 613
Query: 185 AQRKYS 202
+ Y+
Sbjct: 614 HEINYA 619
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AF+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 501
Query: 185 AQRKYS 202
++ Y+
Sbjct: 502 PEQNYA 507
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AF+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 481 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 536
Query: 185 AQRKYS 202
++ Y+
Sbjct: 537 PEQNYA 542
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AF+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 481 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 536
Query: 185 AQRKYS 202
++ Y+
Sbjct: 537 PEQNYA 542
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AF+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 501
Query: 185 AQRKYS 202
++ Y+
Sbjct: 502 PEQNYA 507
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AF+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 446 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 501
Query: 185 AQRKYS 202
++ Y+
Sbjct: 502 PEQNYA 507
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AF+ ++ LA+ +L +P+ + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 899 AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 954
Query: 185 AQRKYS 202
++ Y+
Sbjct: 955 PEQNYA 960
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +2
Query: 32 LANATLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYSPY 208
L N L +P+ + + TDAS GA+L + +S + +FSK + + +Y Y
Sbjct: 727 LTNEPALVIFDPQYPIELHTDASACGYGAILLHRIESKPHVIEYFSKTTTSVESRYHSY 785
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 30.7 bits (66), Expect = 0.29
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AFE ++ LA+ +L +P+ + + TDAS IGAVL Q+ P+ S+ L++
Sbjct: 448 AFEKLRNILASEDVILRYPDYKKAFDLTTDASAYGIGAVLSQEGR----PITMISRTLSD 503
Query: 185 AQRKYS 202
+ Y+
Sbjct: 504 REVNYA 509
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 30.3 bits (65), Expect = 0.38
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 AFEDSKSGLANA-TLLAHPNPRAHLAIMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNN 184
AF+ ++ LA+ +L +P + + TDAS S IGAVL Q+ P+ S+ L
Sbjct: 451 AFQRLRNILASEDVILKYPVFKKPFDLTTDASASGIGAVLSQEGR----PITMISRTLKQ 506
Query: 185 AQRKYS 202
++ Y+
Sbjct: 507 PEQNYA 512
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 8 AFEDSKSGLANAT-LLAHPNPRAHLAIMTDASDSAIGAVLQQ 130
AFE K+ L + +L +P+ R + TDAS +GAVL Q
Sbjct: 477 AFEKLKNVLVSENVMLLYPDYRKAFDLTTDASAFGLGAVLSQ 518
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 83 IMTDASDSAIGAVLQQKSDSGWVPLGFFSKKLNNAQRKYS 202
I TDAS A GAVL Q + +P+ + S+ + S
Sbjct: 5 ITTDASKQACGAVLSQDHNGQQLPVAYASRSFTKGESNKS 44
>AY075502-1|AAL68311.1| 431|Drosophila melanogaster RE52190p
protein.
Length = 431
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 141 ESDFCCNTAPIALSEASVMMARCARGFGCASKVAL 37
E DFC + S + ++ C G G S VAL
Sbjct: 259 EDDFCMRRPAVQESSSPIIAGGCGGGTGSGSGVAL 293
>AE014298-1412|AAF46555.2| 431|Drosophila melanogaster CG34104-PA,
isoform A protein.
Length = 431
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 141 ESDFCCNTAPIALSEASVMMARCARGFGCASKVAL 37
E DFC + S + ++ C G G S VAL
Sbjct: 259 EDDFCMRRPAVQESSSPIIAGGCGGGTGSGSGVAL 293
>AE014298-1411|ABI30973.1| 582|Drosophila melanogaster CG34104-PB,
isoform B protein.
Length = 582
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 141 ESDFCCNTAPIALSEASVMMARCARGFGCASKVAL 37
E DFC + S + ++ C G G S VAL
Sbjct: 259 EDDFCMRRPAVQESSSPIIAGGCGGGTGSGSGVAL 293
>AY113248-1|AAM29253.1| 683|Drosophila melanogaster AT13591p
protein.
Length = 683
Score = 25.8 bits (54), Expect = 8.3
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 43 DFACTPKSTSTSSHHDRCLRQCYRRSVAAKIRFRLGSSRIFLEETEQRS 189
D A PKS +S R+ YRRS + + R R GS LE Q+S
Sbjct: 384 DLAIAPKSRKETSARSNLSRKSYRRS-SPRSRSR-GSRANALESPLQKS 430
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,530,183
Number of Sequences: 53049
Number of extensions: 127077
Number of successful extensions: 388
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 24,988,368
effective HSP length: 48
effective length of database: 22,442,016
effective search space used: 448840320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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