Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E17
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070514-1|AAL47985.1|  355|Drosophila melanogaster GH19857p pro...    31   0.36 
AE013599-2996|AAF57482.1|  355|Drosophila melanogaster CG11200-P...    31   0.36 
AE013599-2995|AAF57481.1|  355|Drosophila melanogaster CG11200-P...    31   0.36 
AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-P...    29   1.9  
AY070817-1|AAL48439.1|  186|Drosophila melanogaster AT24812p pro...    28   3.3  
AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-P...    28   3.3  
AE013599-692|AAM68832.1|  186|Drosophila melanogaster CG30355-PA...    28   3.3  
AY051966-1|AAK93390.1|  330|Drosophila melanogaster LD43270p pro...    27   7.7  
AY033478-1|AAK54464.1|  483|Drosophila melanogaster cortex protein.    27   7.7  
AE014134-1136|AAF52421.1|  483|Drosophila melanogaster CG11330-P...    27   7.7  

>AY070514-1|AAL47985.1|  355|Drosophila melanogaster GH19857p
           protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
 Frame = +3

Query: 30  YIFTMSSKILLYCLLFIS-LATLTVARGNLVIGNIIGGHLIYHEIHEKYA---VPLMKRS 197
           Y  T  S+  L  +LF   L TL  A  + V  N++   ++  ++ E  A   VP+ K+ 
Sbjct: 228 YPGTAYSQSKLAQILFTRHLQTLLDAEKSHVQVNVVHPGIVDTDLFEHSATTSVPIFKKL 287

Query: 198 DKFTVRGVGRELIKAVVINDLKGDGNSYISDGGIGHRNVTIDLQSKRGEGYKFLIDV 368
              T     R ++ A +   ++G G +Y+S+GG G  +      +K  + ++F  D+
Sbjct: 288 FFKTPERGSRTVVFAAIDPSIEGQGGTYLSNGGKGPFHPDAKKPAKCEQLFQFSCDL 344


>AE013599-2996|AAF57482.1|  355|Drosophila melanogaster CG11200-PB,
           isoform B protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
 Frame = +3

Query: 30  YIFTMSSKILLYCLLFIS-LATLTVARGNLVIGNIIGGHLIYHEIHEKYA---VPLMKRS 197
           Y  T  S+  L  +LF   L TL  A  + V  N++   ++  ++ E  A   VP+ K+ 
Sbjct: 228 YPGTAYSQSKLAQILFTRHLQTLLDAEKSHVQVNVVHPGIVDTDLFEHSATTSVPIFKKL 287

Query: 198 DKFTVRGVGRELIKAVVINDLKGDGNSYISDGGIGHRNVTIDLQSKRGEGYKFLIDV 368
              T     R ++ A +   ++G G +Y+S+GG G  +      +K  + ++F  D+
Sbjct: 288 FFKTPERGSRTVVFAAIDPSIEGQGGTYLSNGGKGPFHPDAKKPAKCEQLFQFSCDL 344


>AE013599-2995|AAF57481.1|  355|Drosophila melanogaster CG11200-PA,
           isoform A protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
 Frame = +3

Query: 30  YIFTMSSKILLYCLLFIS-LATLTVARGNLVIGNIIGGHLIYHEIHEKYA---VPLMKRS 197
           Y  T  S+  L  +LF   L TL  A  + V  N++   ++  ++ E  A   VP+ K+ 
Sbjct: 228 YPGTAYSQSKLAQILFTRHLQTLLDAEKSHVQVNVVHPGIVDTDLFEHSATTSVPIFKKL 287

Query: 198 DKFTVRGVGRELIKAVVINDLKGDGNSYISDGGIGHRNVTIDLQSKRGEGYKFLIDV 368
              T     R ++ A +   ++G G +Y+S+GG G  +      +K  + ++F  D+
Sbjct: 288 FFKTPERGSRTVVFAAIDPSIEGQGGTYLSNGGKGPFHPDAKKPAKCEQLFQFSCDL 344


>AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-PA
           protein.
          Length = 122

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 234 IKAVVINDLKGDGNSYISDGGIGHRNVTIDLQSKRGEGYK 353
           IK   +  ++G   + I+ GG+G   VTI   S RG G K
Sbjct: 75  IKITDLKKMRG-ATAEITSGGVGSTTVTIKFTSARGAGIK 113


>AY070817-1|AAL48439.1|  186|Drosophila melanogaster AT24812p
           protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 365 IYEEFVTFTSFTLQVDCNISVSNTSVTDITVSVSFQIVYYNC 240
           + EEF+T T  T    CN  + +TS    + SV F +    C
Sbjct: 4   VLEEFITLTPLTCVQQCNALLGSTSGKPRSCSVFFTLFGVYC 45


>AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-PA
           protein.
          Length = 117

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 234 IKAVVINDLKGD--GNSYISDGGIGHRNVTIDLQSKRGEGYKFLIDV 368
           I A+ I D K      + +  GG G +  TI   S+RG G K ++++
Sbjct: 68  ITAIKITDKKKSHGATAVLVSGGPGSKGATIKFTSERGYGIKDIVEI 114


>AE013599-692|AAM68832.1|  186|Drosophila melanogaster CG30355-PA
           protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 365 IYEEFVTFTSFTLQVDCNISVSNTSVTDITVSVSFQIVYYNC 240
           + EEF+T T  T    CN  + +TS    + SV F +    C
Sbjct: 4   VLEEFITLTPLTCVQQCNALLGSTSGKPRSCSVFFTLFGVYC 45


>AY051966-1|AAK93390.1|  330|Drosophila melanogaster LD43270p
           protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 223 PTPLTVNLSLLFIRGTAYFSCISW 152
           PT   V+   LF +   Y SCI W
Sbjct: 79  PTEFLVSYRKLFFKSMGYISCIEW 102


>AY033478-1|AAK54464.1|  483|Drosophila melanogaster cortex protein.
          Length = 483

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 223 PTPLTVNLSLLFIRGTAYFSCISW 152
           PT   V+   LF +   Y SCI W
Sbjct: 232 PTEFLVSYRKLFFKSMGYISCIEW 255


>AE014134-1136|AAF52421.1|  483|Drosophila melanogaster CG11330-PA
           protein.
          Length = 483

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 223 PTPLTVNLSLLFIRGTAYFSCISW 152
           PT   V+   LF +   Y SCI W
Sbjct: 232 PTEFLVSYRKLFFKSMGYISCIEW 255


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,420,185
Number of Sequences: 53049
Number of extensions: 288969
Number of successful extensions: 642
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)