Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_E17
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   4.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 150  YHEIHEKYAVPLMKRS 197
            Y ++H  YAVP  K+S
Sbjct: 1470 YPDLHNLYAVPTDKKS 1485


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
 Frame = +3

Query: 219 VGRELIKAVVIND----LKGDGNSYISDGG 296
           +G  +  AVVI       KGDG  Y+  GG
Sbjct: 217 IGTCVANAVVIEQPTFLCKGDGKWYLPSGG 246


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 72  LFISLATLTVARGNLVIGNIIGGHLIYH 155
           + ++L  L +    +V+GN++    +YH
Sbjct: 65  ILVTLIVLAIVNVMVVLGNVLVILAVYH 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,069
Number of Sequences: 438
Number of extensions: 2121
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)